RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 RYR3Q15413 4870 aa15.04■□□□□ -0
SEC22C-207ENST00000423701 TRBV6-4A0A1B0GX49 114 aa15.03■□□□□ -0
SEC22C-207ENST00000423701 F2Z2F3 143 aa15.03■□□□□ -0
SEC22C-207ENST00000423701 GYPEP15421 78 aa15.03■□□□□ -0
SEC22C-207ENST00000423701 UBE2DNLQ8IWF7 75 aa15.03■□□□□ -0
SEC22C-207ENST00000423701 GTSF1Q8WW33 167 aa15.03■□□□□ -0
SEC22C-207ENST00000423701 LOC100131303A0A0U1RQF7 123 aa15.02■□□□□ -0
SEC22C-207ENST00000423701 K7EQD1 137 aa15.02■□□□□ -0
SEC22C-207ENST00000423701 RNF212Q495C1 297 aa15.02■□□□□ -0
SEC22C-207ENST00000423701 Q6ZSN1 163 aa15.02■□□□□ -0
SEC22C-207ENST00000423701 HYDINQ4G0P3 5121 aa15.02□□□□□ -0.01
SEC22C-207ENST00000423701 A8MWL6 223 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 CACNG7P62955 275 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 RHOHQ15669 191 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 C15orf54Q8N8G6 183 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 VPS13DQ5THJ4 4388 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 MRPL23Q16540 153 aaKnown RBP15.01□□□□□ -0.01
SEC22C-207ENST00000423701 AP1S3Q96PC3 154 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 PRADC1Q9BSG0 188 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 MSRB1Q9NZV6 116 aa15.01□□□□□ -0.01
SEC22C-207ENST00000423701 CCL18P55774 89 aa15□□□□□ -0.01
SEC22C-207ENST00000423701 UQCC3Q6UW78 93 aa15□□□□□ -0.01
SEC22C-207ENST00000423701 CNFNQ9BYD5 112 aa15□□□□□ -0.01
SEC22C-207ENST00000423701 LINC00588Q9Y4M8 146 aa15□□□□□ -0.01
SEC22C-207ENST00000423701 V9GYV3 84 aa15□□□□□ -0.01
SEC22C-207ENST00000423701 SRIP30626 198 aa14.99□□□□□ -0.01
SEC22C-207ENST00000423701 ESRGQ1W209 222 aa14.99□□□□□ -0.01
SEC22C-207ENST00000423701 C14orf178Q8N769 122 aaPredicted RBP14.99□□□□□ -0.01
SEC22C-207ENST00000423701 COMMD7Q86VX2 200 aa14.98□□□□□ -0.01
SEC22C-207ENST00000423701 OR10G8Q8NGN5 311 aa14.98□□□□□ -0.01
SEC22C-207ENST00000423701 TSKUQ8WUA8 353 aa14.98□□□□□ -0.01
SEC22C-207ENST00000423701 NTF3P20783 257 aa14.97□□□□□ -0.01
SEC22C-207ENST00000423701 WDR73Q6P4I2 378 aa14.97□□□□□ -0.01
SEC22C-207ENST00000423701 NEGR1Q7Z3B1 354 aa14.97□□□□□ -0.01
SEC22C-207ENST00000423701 KIF25-AS1Q9Y6Z4 181 aa14.97□□□□□ -0.01
SEC22C-207ENST00000423701 FOXA3P55318 350 aaPredicted RBP14.96□□□□□ -0.01
SEC22C-207ENST00000423701 FAM3BP58499 235 aaPredicted RBP14.96□□□□□ -0.01
SEC22C-207ENST00000423701 PGLYRP4Q96LB8 373 aa14.96□□□□□ -0.01
SEC22C-207ENST00000423701 GFRA4Q9GZZ7 299 aa14.96□□□□□ -0.01
SEC22C-207ENST00000423701 LINC00862A6NCI5 91 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 SMIM17P0DL12 118 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 ZNF56Q15929 161 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 Q9UF83 564 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 FAM231BA6NCW3 169 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 TRGC1P0CF51 173 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 TWIST1Q15672 202 aa14.95□□□□□ -0.02
SEC22C-207ENST00000423701 ADCYAP1P18509 176 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 EVI2AP22794 236 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 LINC00315P59091 139 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 RAB4BP61018 213 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 PNRC1Q12796 327 aaPredicted RBP14.94□□□□□ -0.02
SEC22C-207ENST00000423701 LYPD5Q6UWN5 251 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 ZNRF2Q8NHG8 242 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 MRPS16Q9Y3D3 137 aaKnown RBP14.94□□□□□ -0.02
SEC22C-207ENST00000423701 KMT2AQ03164 3969 aa14.94□□□□□ -0.02
SEC22C-207ENST00000423701 TMEM218A2RU14 115 aa14.93□□□□□ -0.02
SEC22C-207ENST00000423701 SH2D6Q7Z4S9 175 aa14.93□□□□□ -0.02
SEC22C-207ENST00000423701 GAGE12JA6NER3 117 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 LINC00694P0DN24 101 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 GAGE1Q13065 139 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 GAGE4Q13068 117 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 GAGE5Q13069 117 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 GAGE13Q4V321 117 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 UPK3BQ9BT76 320 aa14.92□□□□□ -0.02
SEC22C-207ENST00000423701 F5H697 171 aa14.91□□□□□ -0.02
SEC22C-207ENST00000423701 MGPP08493 103 aa14.91□□□□□ -0.02
SEC22C-207ENST00000423701 DPH3P1Q9H4G8 78 aa14.91□□□□□ -0.02
SEC22C-207ENST00000423701 IGLV2-18A0A075B6J9 118 aa14.9□□□□□ -0.02
SEC22C-207ENST00000423701 TRBV10-1A0A0K0K1A3 114 aa14.9□□□□□ -0.02
SEC22C-207ENST00000423701 NUP35Q8NFH5 326 aa14.9□□□□□ -0.02
SEC22C-207ENST00000423701 BORCS7Q96B45 105 aa14.9□□□□□ -0.02
SEC22C-207ENST00000423701 SMIM27A0A1W2PRY6 76 aa14.89□□□□□ -0.03
SEC22C-207ENST00000423701 F8W036 122 aa14.89□□□□□ -0.03
SEC22C-207ENST00000423701 NAT8BQ9UHF3 227 aa14.89□□□□□ -0.03
SEC22C-207ENST00000423701 A0A1B0GUT8 65 aa14.89□□□□□ -0.03
SEC22C-207ENST00000423701 ATP6V0E2Q8NHE4 81 aa14.89□□□□□ -0.03
SEC22C-207ENST00000423701 TIRAPP58753 221 aa14.87□□□□□ -0.03
SEC22C-207ENST00000423701 SUMO4Q6EEV6 95 aa14.87□□□□□ -0.03
SEC22C-207ENST00000423701 SEC11CQ9BY50 192 aa14.87□□□□□ -0.03
SEC22C-207ENST00000423701 Q9H8V8 135 aa14.87□□□□□ -0.03
SEC22C-207ENST00000423701 M0R2N4 97 aa14.86□□□□□ -0.03
SEC22C-207ENST00000423701 PPP1R2P9O14990 202 aa14.86□□□□□ -0.03
SEC22C-207ENST00000423701 RPL36AP83881 106 aaKnown RBP14.86□□□□□ -0.03
SEC22C-207ENST00000423701 SMIM15Q7Z3B0 74 aa14.86□□□□□ -0.03
SEC22C-207ENST00000423701 NEXN-AS1Q8NBZ9 246 aa14.86□□□□□ -0.03
SEC22C-207ENST00000423701 RPL36ALQ969Q0 106 aaKnown RBP14.86□□□□□ -0.03
SEC22C-207ENST00000423701 DNAH6Q9C0G6 4158 aa14.85□□□□□ -0.03
SEC22C-207ENST00000423701 TRBV7-3A0A075B6L6 115 aa14.85□□□□□ -0.03
SEC22C-207ENST00000423701 M0QY20 66 aa14.85□□□□□ -0.03
SEC22C-207ENST00000423701 GTSF1LQ9H1H1 148 aa14.85□□□□□ -0.03
SEC22C-207ENST00000423701 MT-ND4LP03901 98 aa14.84□□□□□ -0.03
SEC22C-207ENST00000423701 UBE2D3P61077 147 aa14.83□□□□□ -0.03
SEC22C-207ENST00000423701 UBE2D2P62837 147 aa14.83□□□□□ -0.03
SEC22C-207ENST00000423701 RIGQ13278 110 aa14.83□□□□□ -0.03
SEC22C-207ENST00000423701 Q6ZR54 194 aa14.83□□□□□ -0.03
SEC22C-207ENST00000423701 ANAPC16Q96DE5 110 aa14.83□□□□□ -0.03
SEC22C-207ENST00000423701 H7C1H1 209 aa14.82□□□□□ -0.04
SEC22C-207ENST00000423701 WFDC10BQ8IUB3 73 aa14.82□□□□□ -0.04
SEC22C-207ENST00000423701 NBDYA0A0U1RRE5 68 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms