RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 HHLA3Q9XRX5 114 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 A0A087WWL8 130 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 A0A1W2PPQ1 181 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 A8MWV9 139 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 PAX4O43316 350 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 NUDT3O95989 172 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 CRYBA4P53673 196 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 TCTAP57738 103 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 TNP2Q05952 138 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 C15orf54Q8N8G6 183 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 OR10G8Q8NGN5 311 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 GTSF1Q8WW33 167 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 SFRP2Q96HF1 295 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 PKD1P98161 4303 aa6.48□□□□□ -1.37
PDGFC-202ENST00000422544 A8MWL6 223 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 F2Z2F3 143 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 NXPH4O95158 308 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 CRYGDP07320 174 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 SLAQ13239 276 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 CT83Q5H943 113 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 FAM74A4Q5TZK3 123 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 Q6ZSN1 163 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 C15orf53Q8NAA6 179 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 PGLYRP4Q96LB8 373 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 MSRB1Q9NZV6 116 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 V9GYV3 84 aa6.47□□□□□ -1.37
PDGFC-202ENST00000422544 F8W036 122 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 H3BNG1 76 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 CIDEAO60543 219 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
PDGFC-202ENST00000422544 ADCYAP1P18509 176 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 NTF3P20783 257 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
PDGFC-202ENST00000422544 CTRLP40313 264 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 CACNG7P62955 275 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 ZFP2Q6ZN57 461 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 C14orf178Q8N769 122 aaPredicted RBP6.46□□□□□ -1.38
PDGFC-202ENST00000422544 TSKUQ8WUA8 353 aa6.46□□□□□ -1.38
PDGFC-202ENST00000422544 A0A096LPF7 62 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 LY6G6CO95867 125 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 GYPEP15421 78 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
PDGFC-202ENST00000422544 PNRC1Q12796 327 aaPredicted RBP6.45□□□□□ -1.38
PDGFC-202ENST00000422544 TWIST1Q15672 202 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 WDR73Q6P4I2 378 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
PDGFC-202ENST00000422544 HSPG2P98160 4391 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 HIGD1CA8MV81 97 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 K7EQD1 137 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 RHODO00212 210 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 LGALS9CQ6DKI2 356 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 PRADC1Q9BSG0 188 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 KIF25-AS1Q9Y6Z4 181 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 NACAE9PAV3 2078 aa6.44□□□□□ -1.38
PDGFC-202ENST00000422544 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 FAM231BA6NCW3 169 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 F5H697 171 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 P0DMU3 169 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 FAM231AP0DMU4 169 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 FAM231CP0DMU5 169 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 EVI2AP22794 236 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 LINC00315P59091 139 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 RHOHQ15669 191 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
PDGFC-202ENST00000422544 RNF212Q495C1 297 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 NUP35Q8NFH5 326 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 AP1S3Q96PC3 154 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 SEC11CQ9BY50 192 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 Q9UF83 564 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 NAT8BQ9UHF3 227 aa6.43□□□□□ -1.38
PDGFC-202ENST00000422544 HERC1Q15751 4861 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 PPP1R2P9O14990 202 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 MT-ND4LP03901 98 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 MGPP08493 103 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 SRIP30626 198 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 RAB4BP61018 213 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 GAGE1Q13065 139 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 GAGE4Q13068 117 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 GAGE5Q13069 117 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 ZNF56Q15929 161 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 ESRGQ1W209 222 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 UBE2DNLQ8IWF7 75 aa6.42□□□□□ -1.38
PDGFC-202ENST00000422544 BORCS7Q96B45 105 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms