RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ELANEP08246 267 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 NPC2P61916 151 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 PMVKQ15126 192 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 J3QQQ9 107 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 IGHV3-11P01762 117 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 TEX49A0A1B0GTD5 131 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 PRSS2P07478 247 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 TTC32Q5I0X7 151 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 UNQ9165/PRO28630Q6UXU0 137 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 FAM110DQ8TAY7 271 aaPredicted RBP12.56□□□□□ -0.4
PKP4-204ENST00000421462 EEF1AKMT3Q96AZ1 226 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 TRBV12-3P01733 135 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 PIP4P1Q86T03 277 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 ZNF580Q9UK33 172 aa12.56□□□□□ -0.4
PKP4-204ENST00000421462 CCDC179H3BU77 68 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 ZFP36P26651 326 aaKnown RBP12.55□□□□□ -0.4
PKP4-204ENST00000421462 GPHB5Q86YW7 130 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 C3orf56Q8N813 242 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 SLC25A29Q8N8R3 303 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 NOTCH3Q9UM47 2321 aa12.55□□□□□ -0.4
PKP4-204ENST00000421462 TMEM262E9PQX1 116 aa12.54□□□□□ -0.4
PKP4-204ENST00000421462 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
PKP4-204ENST00000421462 Q8N6K4 173 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 PTPRQQ9UMZ3 2332 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 CUBNO60494 3623 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 RNASE3P12724 160 aaKnown RBP12.53□□□□□ -0.4
PKP4-204ENST00000421462 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
PKP4-204ENST00000421462 Q8N1Y9 231 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 Q8NA96 180 aa12.53□□□□□ -0.4
PKP4-204ENST00000421462 SUMO4Q6EEV6 95 aa12.52□□□□□ -0.4
PKP4-204ENST00000421462 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
PKP4-204ENST00000421462 IGIPA6NJ69 53 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 M0R1W7 72 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 EIF4EBP3O60516 100 aaPredicted RBP12.51□□□□□ -0.41
PKP4-204ENST00000421462 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 SAA4P35542 130 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 NDUFV3P56181 108 aaKnown RBP12.51□□□□□ -0.41
PKP4-204ENST00000421462 SMIM20Q8N5G0 67 aa12.51□□□□□ -0.41
PKP4-204ENST00000421462 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 ZNF56Q15929 161 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 C9orf139Q6ZV77 190 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 Q6ZSV7 163 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 VCX2Q9H322 139 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 UBTD1Q9HAC8 227 aa12.5□□□□□ -0.41
PKP4-204ENST00000421462 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
PKP4-204ENST00000421462 SPXQ9BT56 116 aa12.49□□□□□ -0.41
PKP4-204ENST00000421462 IGF2RP11717 2491 aa12.49□□□□□ -0.41
PKP4-204ENST00000421462 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
PKP4-204ENST00000421462 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
PKP4-204ENST00000421462 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
PKP4-204ENST00000421462 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 VCYO14598 125 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 CITED1Q99966 193 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 CCL21O00585 134 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 SBSPONQ8IVN8 264 aa12.48□□□□□ -0.41
PKP4-204ENST00000421462 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 GAGE7O76087 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 IFITM1P13164 125 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 GAGE4Q13068 117 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 CDSNQ15517 529 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 LINC01620Q4KN68 170 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
PKP4-204ENST00000421462 RHODO00212 210 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 HTN1P15515 57 aa12.47□□□□□ -0.41
PKP4-204ENST00000421462 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
PKP4-204ENST00000421462 TRBV7-1A0A0A6YYK4 115 aa12.46□□□□□ -0.41
PKP4-204ENST00000421462 EDN2P20800 178 aa12.46□□□□□ -0.41
PKP4-204ENST00000421462 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
PKP4-204ENST00000421462 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.41
PKP4-204ENST00000421462 AMELXQ99217 191 aa12.46□□□□□ -0.41
PKP4-204ENST00000421462 C2CD3Q4AC94 2353 aa12.46□□□□□ -0.42
PKP4-204ENST00000421462 ZNF876PQ49A33 203 aa12.46□□□□□ -0.42
PKP4-204ENST00000421462 PPP1R17O96001 155 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
PKP4-204ENST00000421462 EBI3Q14213 229 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 LINC00315P59091 139 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 HERV-K104P63124 156 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 ATXN8Q156A1 80 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 LY6EQ16553 131 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 C2orf82Q6UX34 121 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
PKP4-204ENST00000421462 TRAV8-3A0A0A6YYJ7 113 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 A8MZ25 164 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 OVOL1O14753 267 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 MINOS1Q5TGZ0 78 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 MINOS1-NBL1R4GNA1 71 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 TRIAP1O43715 76 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 CEMP1Q6PRD7 247 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms