RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 CD300EQ496F6 205 aaPredicted RBP13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 C16orf95Q9H693 158 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 MAST4O15021 2626 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 PRAC2D3DTV9 90 aa13.71□□□□□ -0.21
PPFIA3-202ENST00000421230 C11orf44Q8N8P7 122 aa13.71□□□□□ -0.21
PPFIA3-202ENST00000421230 NRACQ8N912 160 aa13.71□□□□□ -0.21
PPFIA3-202ENST00000421230 A0A087WX48 190 aa13.71□□□□□ -0.22
PPFIA3-202ENST00000421230 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.22
PPFIA3-202ENST00000421230 RBAKDNA6NC62 111 aa13.71□□□□□ -0.22
PPFIA3-202ENST00000421230 UNQ9165/PRO28630Q6UXU0 137 aa13.71□□□□□ -0.22
PPFIA3-202ENST00000421230 ZNF479Q96JC4 524 aa13.71□□□□□ -0.22
PPFIA3-202ENST00000421230 K7EMI3 77 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 LAGE3Q14657 143 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 KHDC1LQ5JSQ8 128 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 UBE2E2Q96LR5 201 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 GTSF1LQ9H1H1 148 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 CLPSL1A2RUU4 121 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 GAGE12HA6NDE8 117 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 TSSC4Q9Y5U2 329 aaPredicted RBP13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV3-49A0A0A0MS15 119 aa13.69□□□□□ -0.22
PPFIA3-202ENST00000421230 C11orf21Q9P2W6 132 aa13.69□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV3-66A0A0C4DH42 116 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 LINC01619G3V211 115 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 LGALS1P09382 135 aaKnown RBP13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 SPATA25Q9BR10 227 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 A0A1B0GWB2 263 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 J3QR89 54 aa13.68□□□□□ -0.22
PPFIA3-202ENST00000421230 TRBV7-3A0A075B6L6 115 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 NDUFA4O00483 81 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 NDUFA7O95182 113 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 CD28P10747 220 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 PRO0461Q9UI25 63 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 H3BMG7 143 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 PLNP26678 52 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 SPAG8Q99932 426 aaPredicted RBP13.67□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV4OR15-8A0A075B7B6 117 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 A0A087WW49 117 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 METTL26Q96S19 204 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 SMAGPQ0VAQ4 97 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
PPFIA3-202ENST00000421230 TRAV12-1A0A0B4J245 112 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 A0A1B0GV72 72 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 BUB3O43684 328 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 SH2D6Q7Z4S9 175 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
PPFIA3-202ENST00000421230 ETDBQ3ZM63 59 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 DUX3Q96PT4 197 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 A0A1W2PRX2 142 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 SLC50A1Q9BRV3 221 aa13.64□□□□□ -0.23
PPFIA3-202ENST00000421230 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 CITED2Q99967 270 aaPredicted RBP13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 F8VRH5 84 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 H7C1H1 209 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 EDN2P20800 178 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 PROK1P58294 105 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 C4orf3Q8WVX3 66 aa13.63□□□□□ -0.23
PPFIA3-202ENST00000421230 C8orf86Q6ZUL3 223 aa13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 MYMXA0A1B0GTQ4 84 aa13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 HOXD3P31249 432 aaPredicted RBP13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 OR11H1Q8NG94 326 aa13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 U3KQE9 123 aa13.62□□□□□ -0.23
PPFIA3-202ENST00000421230 TRAV8-2A0A0B4J237 113 aa13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 SLURP1P55000 103 aa13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 MRPL53Q96EL3 112 aaKnown RBP13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 MRAP2Q96G30 205 aa13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 MORN3Q6PF18 240 aaPredicted RBP13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 SMIM2Q9BVW6 85 aa13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 DAZ1Q9NQZ3 744 aaKnown RBP13.6□□□□□ -0.23
PPFIA3-202ENST00000421230 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 KRTAP10-3P60369 221 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 TMEM78Q5T7P6 136 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 C9orf47Q6ZRZ4 202 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 TENM1Q9UKZ4 2725 aa13.59□□□□□ -0.23
PPFIA3-202ENST00000421230 SPANXN1Q5VSR9 72 aa13.58□□□□□ -0.24
PPFIA3-202ENST00000421230 NEXN-AS1Q8NBZ9 246 aa13.58□□□□□ -0.24
PPFIA3-202ENST00000421230 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
PPFIA3-202ENST00000421230 INSL3P51460 131 aa13.58□□□□□ -0.24
PPFIA3-202ENST00000421230 AGRNO00468 2067 aa13.57□□□□□ -0.24
PPFIA3-202ENST00000421230 ORMDL2Q53FV1 153 aa13.57□□□□□ -0.24
PPFIA3-202ENST00000421230 Q6ZQT7 251 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms