RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 VSIG2Q96IQ7 327 aa9.27□□□□□ -0.93
UBR4-205ENST00000417040 MDFICQ9P1T7 246 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 DOCK10Q96BY6 2186 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 IGKV2D-26A0A0A0MRZ7 120 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 DEFB4AO15263 64 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 ATP5G1P05496 136 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 AKAP6Q13023 2319 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 ZNF80P51504 273 aaPredicted RBP9.26□□□□□ -0.93
UBR4-205ENST00000417040 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 CCL24O00175 119 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 PROP1O75360 226 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
UBR4-205ENST00000417040 WT1P19544 449 aaPredicted RBP9.26□□□□□ -0.93
UBR4-205ENST00000417040 NDUFC2O95298 119 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 TNRC6AQ8NDV7 1962 aaKnown RBP9.25□□□□□ -0.93
UBR4-205ENST00000417040 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 IGHV4OR15-8A0A075B7B6 117 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 A0A087WW49 117 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 IGLV2-8P01709 118 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 DYSFO75923 2080 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 COL4A3Q01955 1670 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 NREPQ16612 68 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
UBR4-205ENST00000417040 COX7A2LO14548 114 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 IGFL3Q6UXB1 125 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 CTRLP40313 264 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 ZNF407Q9C0G0 2248 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 H0YGX0 51 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
UBR4-205ENST00000417040 NDUFV3P56181 108 aaKnown RBP9.23□□□□□ -0.93
UBR4-205ENST00000417040 Q8N9W7 124 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 ATP6V0E2Q8NHE4 81 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
UBR4-205ENST00000417040 INTS1Q8N201 2190 aaKnown RBP9.23□□□□□ -0.93
UBR4-205ENST00000417040 ELANEP08246 267 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.932e-7■■□□□ 12.3
UBR4-205ENST00000417040 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 H3BUA1 57 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 NRGNQ92686 78 aa9.23□□□□□ -0.93
UBR4-205ENST00000417040 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
UBR4-205ENST00000417040 Q6ZPA2 131 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
UBR4-205ENST00000417040 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
UBR4-205ENST00000417040 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
UBR4-205ENST00000417040 DOCK7Q96N67 2140 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 UNQ9165/PRO28630Q6UXU0 137 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 Q6ZSR3 168 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 C5orf56Q8N8D9 126 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 VPREB3Q9UKI3 123 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 IGKV1D-37A0A075B6S9 117 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 SLPIP03973 132 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 SEM1Q6ZVN7 128 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 WISP2O76076 250 aa9.22□□□□□ -0.93
UBR4-205ENST00000417040 APC2O95996 2303 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 IGHV1-58A0A0C4DH39 117 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 SCXQ7RTU7 201 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 A0A0U1RQV1 116 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 C16orf74Q96GX8 76 aa9.21□□□□□ -0.93
UBR4-205ENST00000417040 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
UBR4-205ENST00000417040 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
UBR4-205ENST00000417040 C1orf229Q6ZS94 237 aaPredicted RBP9.2□□□□□ -0.94
UBR4-205ENST00000417040 TRBV7-3A0A075B6L6 115 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 DKK4Q9UBT3 224 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 IGHV4-30-2A0A087WSY4 118 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 ZFP36P26651 326 aaKnown RBP9.2□□□□□ -0.94
UBR4-205ENST00000417040 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 UPK3BQ9BT76 320 aa9.2□□□□□ -0.94
UBR4-205ENST00000417040 ZNF106Q9H2Y7 1883 aaKnown RBP9.2□□□□□ -0.94
UBR4-205ENST00000417040 Q8N7P7 452 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 A0A0J9YXY3 114 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 TIRAPP58753 221 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
UBR4-205ENST00000417040 J3QLI3 93 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 IGF1P05019 195 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 RBX1P62877 108 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 MIAQ16674 131 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 RMI2Q96E14 147 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 BRWD1-AS2P59051 145 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 PIFOQ8TCI5 191 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
UBR4-205ENST00000417040 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
UBR4-205ENST00000417040 FAM110AQ9BQ89 295 aa9.17□□□□□ -0.94
UBR4-205ENST00000417040 H3BT86 120 aa9.17□□□□□ -0.94
UBR4-205ENST00000417040 MP68P56378 58 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms