RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 CFC1P0CG37 223 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
CHEK2-210ENST00000416671 IGHV3OR16-13A0A075B7E8 117 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 IGHV3-74A0A0B4J1X5 117 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 IGHV3-66A0A0C4DH42 116 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 SLC25A20O43772 301 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 CLEC3BP05452 202 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 ASIPP42127 132 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 HERVK_113P61574 105 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.47□□□□□ -0.732e-7■■■■■ 37.7
CHEK2-210ENST00000416671 SNCGO76070 127 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
CHEK2-210ENST00000416671 DOPEY2Q9Y3R5 2298 aa10.46□□□□□ -0.73
CHEK2-210ENST00000416671 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.73
CHEK2-210ENST00000416671 IGHV3-30P01768 117 aa10.46□□□□□ -0.73
CHEK2-210ENST00000416671 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.73
CHEK2-210ENST00000416671 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.73
CHEK2-210ENST00000416671 Q6ZQT7 251 aa10.46□□□□□ -0.73
CHEK2-210ENST00000416671 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.73
CHEK2-210ENST00000416671 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.74
CHEK2-210ENST00000416671 BUB3O43684 328 aa10.46□□□□□ -0.74
CHEK2-210ENST00000416671 ATP5J2P56134 94 aa10.46□□□□□ -0.74
CHEK2-210ENST00000416671 KRTAP10-9P60411 292 aa10.46□□□□□ -0.74
CHEK2-210ENST00000416671 CLEC19AQ6UXS0 136 aa10.46□□□□□ -0.74
CHEK2-210ENST00000416671 C9JAW5 83 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
CHEK2-210ENST00000416671 IGHV4-30-2A0A087WSY4 118 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 IGHV3-49A0A0A0MS15 119 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE12JA6NER3 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 C11orf86A6NJI1 115 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 M0QXV9 152 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE7O76087 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE12FP0CL80 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE12GP0CL81 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE12IP0CL82 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 GAGE4Q13068 117 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
CHEK2-210ENST00000416671 HELZ2Q9BYK8 2649 aaKnown RBP10.45□□□□□ -0.74
CHEK2-210ENST00000416671 IGHV4-38-2P0DP08 117 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 TTC32Q5I0X7 151 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 Q6ZS46 218 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 C5orf56Q8N8D9 126 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 SLC25A29Q8N8R3 303 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 PIMREGQ9BSJ6 248 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 DPH3P1Q9H4G8 78 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 CSPG4Q6UVK1 2322 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 TRAV4A0A0B4J268 109 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 M0R381 172 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 CRYGDP07320 174 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 LY6EQ16553 131 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 ANXA2RQ3ZCQ2 193 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 CCDC140Q96MF4 163 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
CHEK2-210ENST00000416671 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
CHEK2-210ENST00000416671 IFITM1P13164 125 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 EMP1P54849 157 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
CHEK2-210ENST00000416671 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 ZANQ9Y493 2812 aa10.43□□□□□ -0.74
CHEK2-210ENST00000416671 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 MGPP08493 103 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 CRIP2P52943 208 aaPredicted RBP10.42□□□□□ -0.74
CHEK2-210ENST00000416671 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
CHEK2-210ENST00000416671 C10orf105Q8TEF2 133 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 IGHV1-69DA0A0B4J2H0 117 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 IGHV1-69P01742 117 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
CHEK2-210ENST00000416671 RAX2Q96IS3 184 aa10.42□□□□□ -0.74
CHEK2-210ENST00000416671 CRLF1O75462 422 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 SPRY2O43597 315 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 PMVKQ15126 192 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 APCP25054 2843 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 NAV2Q8IVL1 2488 aa10.41□□□□□ -0.74
CHEK2-210ENST00000416671 S100A4P26447 101 aaKnown RBP10.4□□□□□ -0.74
CHEK2-210ENST00000416671 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 PRR9Q5T870 116 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 Q6Q795 121 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 Q8N1Y9 231 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
CHEK2-210ENST00000416671 PPP1R17O96001 155 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 TSHBP01222 138 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 ARL3P36405 182 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
CHEK2-210ENST00000416671 CLPSL1A2RUU4 121 aa10.39□□□□□ -0.75
CHEK2-210ENST00000416671 J3KRW8 73 aa10.39□□□□□ -0.75
CHEK2-210ENST00000416671 TP53TG1Q9Y2A0 90 aa10.39□□□□□ -0.75
CHEK2-210ENST00000416671 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
CHEK2-210ENST00000416671 A4D1N5 150 aa10.39□□□□□ -0.75
CHEK2-210ENST00000416671 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms