RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ZFP82Q8N141 532 aa13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 C14orf178Q8N769 122 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 Q9UF83 564 aa13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 DNAH5Q8TE73 4624 aa13.19□□□□□ -0.3
TSPAN4-209ENST00000409543 CCL20P78556 96 aa13.19□□□□□ -0.3
TSPAN4-209ENST00000409543 TCTE3Q8IZS6 198 aa13.19□□□□□ -0.3
TSPAN4-209ENST00000409543 MANBALQ9NQG1 85 aa13.19□□□□□ -0.3
TSPAN4-209ENST00000409543 APOBP04114 4563 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-209ENST00000409543 CXCL1P09341 107 aa13.18□□□□□ -0.3
TSPAN4-209ENST00000409543 FAM74A4Q5TZK3 123 aa13.18□□□□□ -0.3
TSPAN4-209ENST00000409543 GNG13Q9P2W3 67 aa13.18□□□□□ -0.3
TSPAN4-209ENST00000409543 A0A087WWL8 130 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 ABCA13Q86UQ4 5058 aa13.17□□□□□ -0.3
TSPAN4-209ENST00000409543 A0A087WWC5 75 aa13.16□□□□□ -0.3
TSPAN4-209ENST00000409543 RPL35P42766 123 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-209ENST00000409543 RPL19P84098 196 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-209ENST00000409543 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
TSPAN4-209ENST00000409543 KRTAP4-5Q9BYR2 181 aa13.16□□□□□ -0.3
TSPAN4-209ENST00000409543 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
TSPAN4-209ENST00000409543 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
TSPAN4-209ENST00000409543 SULT1A2P50226 295 aa13.15□□□□□ -0.3
TSPAN4-209ENST00000409543 TRBV10-1A0A0K0K1A3 114 aa13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 PSCAO43653 123 aa13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 LAGE3Q14657 143 aa13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 Q9HAA7 133 aa13.14□□□□□ -0.31
TSPAN4-209ENST00000409543 SNAI2O43623 268 aa13.13□□□□□ -0.31
TSPAN4-209ENST00000409543 C1QBP02746 253 aa13.13□□□□□ -0.31
TSPAN4-209ENST00000409543 Q6ZNX1 250 aa13.13□□□□□ -0.31
TSPAN4-209ENST00000409543 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
TSPAN4-209ENST00000409543 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
TSPAN4-209ENST00000409543 LRCOL1A6NCL2 159 aa13.12□□□□□ -0.31
TSPAN4-209ENST00000409543 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
TSPAN4-209ENST00000409543 SLC51BQ86UW2 128 aa13.12□□□□□ -0.31
TSPAN4-209ENST00000409543 Q8N1X5 172 aa13.12□□□□□ -0.31
TSPAN4-209ENST00000409543 RAB4BP61018 213 aa13.11□□□□□ -0.31
TSPAN4-209ENST00000409543 RPL36AP83881 106 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-209ENST00000409543 Q8N3U1 123 aa13.11□□□□□ -0.31
TSPAN4-209ENST00000409543 RPL36ALQ969Q0 106 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-209ENST00000409543 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-209ENST00000409543 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
TSPAN4-209ENST00000409543 TM2D2Q9BX73 214 aa13.1□□□□□ -0.31
TSPAN4-209ENST00000409543 TRBV7-3A0A075B6L6 115 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 PDE6DO43924 150 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 IFNA1P01562 189 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 UBE2D3P61077 147 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 UBE2D2P62837 147 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 OR10G8Q8NGN5 311 aa13.09□□□□□ -0.31
TSPAN4-209ENST00000409543 TRAV8-3A0A0A6YYJ7 113 aa13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 TOR2AQ5JU69 321 aa13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 DAZ4Q86SG3 579 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 DAZ3Q9NR90 486 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-209ENST00000409543 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 GCSHP23434 173 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 GNG4P50150 75 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 KRTAP10-1P60331 282 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 ZNF56Q15929 161 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 NIT1Q86X76 327 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 DAZAP1Q96EP5 407 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
TSPAN4-209ENST00000409543 C19orf71A6NCJ1 209 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 BCL2P10415 239 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 AKAP14Q86UN6 197 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 Q8N814 137 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 MED9Q9NWA0 146 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 VAX2Q9UIW0 290 aa13.06□□□□□ -0.32
TSPAN4-209ENST00000409543 IGLV5-52A0A0A0MRZ9 124 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 TAGLN2P37802 199 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 XGP55808 180 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 SSTP61278 116 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 KIF25-AS1Q9Y6Z4 181 aa13.04□□□□□ -0.32
TSPAN4-209ENST00000409543 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 F5H697 171 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 SMIM17P0DL12 118 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 GZMBP10144 247 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 FER1L6-AS1Q8NA97 138 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 BIN3Q9NQY0 253 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 COX11Q9Y6N1 276 aa13.03□□□□□ -0.32
TSPAN4-209ENST00000409543 A0A087WX48 190 aa13.02□□□□□ -0.33
TSPAN4-209ENST00000409543 TRBV6-8A0A0A6YYG3 113 aa13.02□□□□□ -0.33
TSPAN4-209ENST00000409543 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms