RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CHTF8P0CG12 524 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 UBE2D3P61077 147 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 UBE2D2P62837 147 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
CHMP3-203ENST00000409225 MIAQ16674 131 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
CHMP3-203ENST00000409225 IL36BQ9NZH7 164 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 TRBV6-8A0A0A6YYG3 113 aa10.56□□□□□ -0.72
CHMP3-203ENST00000409225 RAB2AP61019 212 aa10.56□□□□□ -0.72
CHMP3-203ENST00000409225 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
CHMP3-203ENST00000409225 OR11H4Q8NGC9 324 aa10.56□□□□□ -0.72
CHMP3-203ENST00000409225 SMIM3Q9BZL3 60 aa10.56□□□□□ -0.72
CHMP3-203ENST00000409225 TRBV7-3A0A075B6L6 115 aa10.55□□□□□ -0.72
CHMP3-203ENST00000409225 ARL14EPLP0DKL9 152 aa10.55□□□□□ -0.72
CHMP3-203ENST00000409225 KIF25-AS1Q9Y6Z4 181 aa10.55□□□□□ -0.72
CHMP3-203ENST00000409225 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 B4DEV8 164 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 C7orf33Q8WU49 177 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 RNF185Q96GF1 192 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 HSPB11Q9Y547 144 aa10.54□□□□□ -0.72
CHMP3-203ENST00000409225 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 hDV102S1A0JD36 115 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 PTTG1O95997 202 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
CHMP3-203ENST00000409225 KRTAP26-1Q6PEX3 210 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 EPDR1Q9UM22 224 aa10.53□□□□□ -0.72
CHMP3-203ENST00000409225 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
CHMP3-203ENST00000409225 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
CHMP3-203ENST00000409225 M0R381 172 aa10.52□□□□□ -0.73
CHMP3-203ENST00000409225 SUMO1P63165 101 aaKnown RBP10.52□□□□□ -0.73
CHMP3-203ENST00000409225 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 M0R036 132 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 LINC00269Q8N2A0 174 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 RBM38Q9H0Z9 239 aaKnown RBP10.51□□□□□ -0.73
CHMP3-203ENST00000409225 PHLDA3Q9Y5J5 127 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 LPAP08519 4548 aa10.51□□□□□ -0.73
CHMP3-203ENST00000409225 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-203ENST00000409225 PKIAP61925 76 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 OR10G8Q8NGN5 311 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 WFDC1Q9HC57 220 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 PRR34Q9NV39 138 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
CHMP3-203ENST00000409225 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 FAM240BA0A1B0GVZ2 78 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 KRBOX1C9JBD0 128 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 STAG3L2P0CL84 134 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 STAG3L3P0CL85 134 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 TPT1P13693 172 aaKnown RBP10.49□□□□□ -0.73
CHMP3-203ENST00000409225 GCHFRP30047 84 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 KRTAP10-8P60410 259 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 RBX1P62877 108 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 PRR3P79522 188 aaKnown RBP10.49□□□□□ -0.73
CHMP3-203ENST00000409225 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
CHMP3-203ENST00000409225 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-203ENST00000409225 SLPIP03973 132 aa10.48□□□□□ -0.73
CHMP3-203ENST00000409225 RPL12P30050 165 aaKnown RBP10.48□□□□□ -0.73
CHMP3-203ENST00000409225 GAGE6Q13070 117 aa10.48□□□□□ -0.73
CHMP3-203ENST00000409225 SUN5Q8TC36 379 aa10.48□□□□□ -0.73
CHMP3-203ENST00000409225 TMSB15BA0A087X1C1 80 aa10.47□□□□□ -0.73
CHMP3-203ENST00000409225 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
CHMP3-203ENST00000409225 ZFP82Q8N141 532 aa10.47□□□□□ -0.73
CHMP3-203ENST00000409225 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-203ENST00000409225 PPP1R1CQ8WVI7 109 aa10.47□□□□□ -0.73
CHMP3-203ENST00000409225 SH2D1AO60880 128 aa10.46□□□□□ -0.73
CHMP3-203ENST00000409225 CRIP1P50238 77 aa10.46□□□□□ -0.73
CHMP3-203ENST00000409225 ZNF56Q15929 161 aa10.46□□□□□ -0.73
CHMP3-203ENST00000409225 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
CHMP3-203ENST00000409225 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
CHMP3-203ENST00000409225 RAB4BP61018 213 aa10.45□□□□□ -0.74
CHMP3-203ENST00000409225 REG3AQ06141 175 aa10.45□□□□□ -0.74
CHMP3-203ENST00000409225 REG3GQ6UW15 175 aa10.45□□□□□ -0.74
CHMP3-203ENST00000409225 Q86TA4 180 aa10.45□□□□□ -0.74
CHMP3-203ENST00000409225 MPC2O95563 127 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 H2BFSP57053 126 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 LYPD6BQ8NI32 183 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 KRTAP9-2Q9BYQ4 174 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 TMEM167BQ9NRX6 74 aa10.44□□□□□ -0.74
CHMP3-203ENST00000409225 IFNA7P01567 189 aa10.43□□□□□ -0.74
CHMP3-203ENST00000409225 RAB5CP51148 216 aa10.43□□□□□ -0.74
CHMP3-203ENST00000409225 COX6A2Q02221 97 aa10.43□□□□□ -0.74
CHMP3-203ENST00000409225 PRR27Q6MZM9 219 aa10.43□□□□□ -0.74
CHMP3-203ENST00000409225 DERL1Q9BUN8 251 aa10.43□□□□□ -0.74
CHMP3-203ENST00000409225 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
CHMP3-203ENST00000409225 MUC21A0A0G2JKD1 596 aa10.42□□□□□ -0.74
CHMP3-203ENST00000409225 PET100P0DJ07 73 aa10.42□□□□□ -0.74
CHMP3-203ENST00000409225 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
CHMP3-203ENST00000409225 FAM162BQ5T6X4 162 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms