RNA–Protein interactions for RNA: ENST00000408515.1

MIR548F4-201, Transcript of microRNA 548f-4, humanhuman

BASIC

Gene MIR548F4, Length 105 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F4-201ENST00000408515 ZNF609O15014 1411 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 ERCC6L2Q5T890 1561 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 RPP14O95059 124 aaKnown RBP-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 PPP1R2P41236 205 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 CARD19Q96LW7 228 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 C9orf16Q9BUW7 83 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 LRTM1Q9HBL6 345 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 PRNDQ9UKY0 176 aa-3.53□□□□□ -2.97
MIR548F4-201ENST00000408515 DEFB105AQ8NG35 78 aa-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 WFDC6Q9BQY6 131 aa-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 SSR3Q9UNL2 185 aa-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 NUBP2Q9Y5Y2 271 aa-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 CASZ1Q86V15 1759 aa-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 PLECQ15149 4684 aaKnown RBP-3.54□□□□□ -2.98
MIR548F4-201ENST00000408515 SIPA1L3O60292 1781 aaPredicted RBP-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 MAP1LC3B2A6NCE7 125 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 SLC25A6P12236 298 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 CYBAP13498 195 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 AKR1D1P51857 326 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 ARF6P62330 175 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 RPL19P84098 196 aaKnown RBP-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 CFAP126Q5VTH2 177 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 TEX29Q8N6K0 151 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 LAMTOR3Q9UHA4 124 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 ATP6V1DQ9Y5K8 247 aa-3.55□□□□□ -2.98
MIR548F4-201ENST00000408515 WNK3Q9BYP7 1800 aa-3.56□□□□□ -2.98
MIR548F4-201ENST00000408515 EDDM3BP56851 147 aa-3.56□□□□□ -2.98
MIR548F4-201ENST00000408515 ZFYVE9O95405 1425 aa-3.56□□□□□ -2.98
MIR548F4-201ENST00000408515 TRAPPC8Q9Y2L5 1435 aa-3.56□□□□□ -2.98
MIR548F4-201ENST00000408515 TRBV27A0A0K0K1C4 114 aa-3.57□□□□□ -2.98
MIR548F4-201ENST00000408515 LRP6O75581 1613 aa-3.57□□□□□ -2.98
MIR548F4-201ENST00000408515 LSM6P62312 80 aaKnown RBP-3.57□□□□□ -2.98
MIR548F4-201ENST00000408515 AKR1C8PQ5T2L2 129 aa-3.57□□□□□ -2.98
MIR548F4-201ENST00000408515 CUBNO60494 3623 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 SMIM23A6NLE4 172 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 J3KT08 172 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 SDC2P34741 201 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 Q5VV11 94 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 SLC25A26Q70HW3 274 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 NDUFA11Q86Y39 141 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 NUP35Q8NFH5 326 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 LINC00472Q9H8W2 130 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 PKD1P98161 4303 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 PHIPQ8WWQ0 1821 aa-3.58□□□□□ -2.98
MIR548F4-201ENST00000408515 TCOF1Q13428 1488 aaKnown RBP-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 PRRC2CQ9Y520 2896 aaKnown RBP-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 ERVS71-1P61550 626 aa-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 LSM3P62310 102 aaKnown RBP-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 SPA17Q15506 151 aa-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 ZNF142P52746 1687 aaPredicted RBP-3.59□□□□□ -2.98
MIR548F4-201ENST00000408515 NIPBLQ6KC79 2804 aaeCLIP-3.6□□□□□ -2.99
MIR548F4-201ENST00000408515 PPP5D1E7EU14 171 aa-3.6□□□□□ -2.99
MIR548F4-201ENST00000408515 CRYBA4P53673 196 aa-3.6□□□□□ -2.99
MIR548F4-201ENST00000408515 LINC00305Q7Z4B0 112 aa-3.6□□□□□ -2.99
MIR548F4-201ENST00000408515 MED11Q9P086 117 aa-3.6□□□□□ -2.99
MIR548F4-201ENST00000408515 FAM135BQ49AJ0 1406 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 AKAP9Q99996 3911 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 TPM3P06753 285 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 BASP1P80723 227 aaKnown RBP-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 SPCS2Q15005 226 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 NDUFAF1Q9Y375 327 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 KIF13AQ9H1H9 1805 aa-3.61□□□□□ -2.99
MIR548F4-201ENST00000408515 TRAV13-1A0A0B4J241 112 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 FAM92AA1XBS5 289 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 H3BMG7 143 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 CSN2P05814 226 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 CRYGSP22914 178 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 PCBD1P61457 104 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 LYRM2Q9NU23 88 aaPredicted RBP-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 TAS2R8Q9NYW2 309 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 KDM3BQ7LBC6 1761 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 MYH1P12882 1939 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 PAPPAQ13219 1627 aa-3.62□□□□□ -2.99
MIR548F4-201ENST00000408515 GABARAPH6UMI1 98 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 HBDP02042 147 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 S100A6P06703 90 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 SMIM6P0DI80 62 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 LTC4SQ16873 150 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 ERG28Q9UKR5 140 aa-3.63□□□□□ -2.99
MIR548F4-201ENST00000408515 TRAV12-3A0A0B4J271 114 aa-3.64□□□□□ -2.99
MIR548F4-201ENST00000408515 MT1AP04731 61 aa-3.65□□□□□ -2.99
MIR548F4-201ENST00000408515 LLPHQ9BRT6 129 aaKnown RBP-3.65□□□□□ -2.99
MIR548F4-201ENST00000408515 SH3BGRL3Q9H299 93 aa-3.65□□□□□ -2.99
MIR548F4-201ENST00000408515 ANKRD31Q8N7Z5 1873 aa-3.66□□□□□ -3
MIR548F4-201ENST00000408515 IFT172Q9UG01 1749 aa-3.66□□□□□ -3
MIR548F4-201ENST00000408515 PNMA8CA0A1B0GUJ8 204 aa-3.66□□□□□ -3
MIR548F4-201ENST00000408515 SRP9P49458 86 aaKnown RBP-3.66□□□□□ -3
MIR548F4-201ENST00000408515 TPM4P67936 248 aa-3.66□□□□□ -3
MIR548F4-201ENST00000408515 BAGE3Q86Y29 109 aa-3.66□□□□□ -3
MIR548F4-201ENST00000408515 NRXN2Q9P2S2 1712 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 CCDC171Q6TFL3 1326 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 NBASA2RRP1 2371 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 TRAV2A0A0B4J234 112 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 TRDV1A0A1B0GX56 115 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 CEBPGP53567 150 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 TMED2Q15363 201 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 CNPY4Q8N129 248 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 ARMC1Q9NVT9 282 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 SS18L2Q9UHA2 77 aa-3.67□□□□□ -3
MIR548F4-201ENST00000408515 IBTKQ9P2D0 1353 aaPredicted RBP-3.67□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms