RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 A6NJY4 79 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 H3BMM0 161 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 Q8N8P6 123 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 FRYQ5TBA9 3013 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 I3L3M4 83 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 IGLV2-8P01709 118 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 MDFICQ9P1T7 246 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 SPEGQ15772 3267 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 TEP1Q99973 2627 aaKnown RBP6.85□□□□□ -1.31
LIG4-202ENST00000405925 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 PAX4O43316 350 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 CTAG1AP78358 180 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
LIG4-202ENST00000405925 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
LIG4-202ENST00000405925 FRMD6-AS1P0C7T7 363 aa6.84□□□□□ -1.31
LIG4-202ENST00000405925 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
LIG4-202ENST00000405925 MRGPRG-AS1Q2M3A8 158 aa6.84□□□□□ -1.31
LIG4-202ENST00000405925 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
LIG4-202ENST00000405925 C16orf74Q96GX8 76 aa6.84□□□□□ -1.31
LIG4-202ENST00000405925 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 TRBV6-1A0A0K0K1D8 114 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 F8W735 103 aaPredicted RBP6.84□□□□□ -1.32
LIG4-202ENST00000405925 PYY3Q5JQD4 70 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 GDF5OSQ5U4N7 250 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 MLST8Q9BVC4 326 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 ESM1Q9NQ30 184 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 BOD1L1Q8NFC6 3051 aa6.84□□□□□ -1.32
LIG4-202ENST00000405925 TRAV8-2A0A0B4J237 113 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 EDN2P20800 178 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 LYRM7Q5U5X0 104 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 RHOHQ15669 191 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 NDUFA7O95182 113 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 GAGE6Q13070 117 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
LIG4-202ENST00000405925 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
LIG4-202ENST00000405925 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
LIG4-202ENST00000405925 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 TRBV7-9A0A0J9YWB2 115 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 JPT2Q9H910 190 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 MGAM2Q2M2H8 2515 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 ZNF815PA8K554 130 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 CTRLP40313 264 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
LIG4-202ENST00000405925 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
LIG4-202ENST00000405925 IGHV1-24A0A0C4DH33 117 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 OR13C6PQ8NH95 151 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 DMXL1Q9Y485 3027 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 SEC11AP67812 179 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 TP53TG3Q9ULZ0 132 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 FLNCQ14315 2725 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 MAST4O15021 2626 aa6.81□□□□□ -1.32
LIG4-202ENST00000405925 ATP5G1P05496 136 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 ERASQ7Z444 233 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 APOMO95445 188 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 PLNP26678 52 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
LIG4-202ENST00000405925 TMEM263Q8WUH6 116 aaKnown RBP6.8□□□□□ -1.32
LIG4-202ENST00000405925 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
LIG4-202ENST00000405925 GYPEP15421 78 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 CRIP1P50238 77 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 STPG4Q8N801 248 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 ODF3Q96PU9 254 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 TRAV2A0A0B4J234 112 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 COPS9Q8WXC6 57 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 COX6CP09669 75 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 Q6ZWC4 215 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 ZNF580Q9UK33 172 aa6.79□□□□□ -1.32
LIG4-202ENST00000405925 MED14OSP0DP75 135 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 SS18Q15532 418 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.78□□□□□ -1.32
LIG4-202ENST00000405925 IGKV2-29A2NJV5 120 aaPredicted RBP6.78□□□□□ -1.32
LIG4-202ENST00000405925 CKS1BP61024 79 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 PMVKQ15126 192 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 CLPSL2Q6UWE3 100 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 Q6ZTI0 123 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 GTF2H5Q6ZYL4 71 aa6.78□□□□□ -1.32
LIG4-202ENST00000405925 BRI3O95415 125 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 ANGP03950 147 aaKnown RBP6.77□□□□□ -1.33
LIG4-202ENST00000405925 ATMQ13315 3056 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 MRPS12O15235 138 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms