RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 A0A087WTM6 91 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 IL5P05113 134 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 CCL3L1P16619 93 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 RRAS2P62070 204 aaPredicted RBP0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 UBE2G1P62253 170 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 S100A12P80511 92 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 S100A7L2Q5SY68 101 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 TCEAL4Q96EI5 215 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 SDF2Q99470 211 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 TMEM242Q9NWH2 141 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 TANC1Q9C0D5 1861 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 MYOM3Q5VTT5 1437 aa0.37□□□□□ -2.35
CBX3P9-201ENST00000402326 ABCA4P78363 2273 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 TNS1Q9HBL0 1735 aaKnown RBP0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 TMEM2Q9UHN6 1383 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 NDUFA2O43678 99 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 PRH1P02810 166 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 KRTAP2-3P0C7H8 128 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 CCDC58Q4VC31 144 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 C9orf116Q5BN46 136 aaPredicted RBP0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 RPL7L1Q6DKI1 246 aaKnown RBP0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 C4orf33Q8N1A6 199 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 KCNRGQ8N5I3 272 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 COX7B2Q8TF08 81 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 PPP1R1CQ8WVI7 109 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 KRTAP2-4Q9BYR9 128 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 KRTAP2-1Q9BYU5 128 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 PLAC8Q9NZF1 115 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 SPAG17Q6Q759 2223 aa0.36□□□□□ -2.35
CBX3P9-201ENST00000402326 NRXN2Q9P2S2 1712 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 KMT2DO14686 5537 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 AKAP11Q9UKA4 1901 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 RBAKDNA6NC62 111 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 GUCA1AP43080 201 aaPredicted RBP0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 SSBP1Q04837 148 aaKnown RBP0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 SCIMPQ6UWF3 145 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 SPTSSAQ969W0 71 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 TMEM191AQ9H0A3 160 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 RPRMQ9NS64 109 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 USP24Q9UPU5 2620 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 PHIPQ8WWQ0 1821 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 ABCA1O95477 2261 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 PLXNA1Q9UIW2 1896 aa0.35□□□□□ -2.35
CBX3P9-201ENST00000402326 LAMB1P07942 1786 aa0.34□□□□□ -2.35
CBX3P9-201ENST00000402326 ASH1LQ9NR48 2969 aaKnown RBP0.34□□□□□ -2.35
CBX3P9-201ENST00000402326 SPEF2Q9C093 1822 aa0.34□□□□□ -2.35
CBX3P9-201ENST00000402326 A6NIN4 97 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 F2Z2F3 143 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 GNG7O60262 68 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 PHLPP1O60346 1717 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 SNCGO76070 127 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 HMGN1P05114 100 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 PIPP12273 146 aaPredicted RBP0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 FAM74A4Q5TZK3 123 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 SPTSSBQ8NFR3 76 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 DPH3Q96FX2 82 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 Q96NJ1 140 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 TSC22D3Q99576 134 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 SMR3AQ99954 134 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 GRIN2AQ12879 1464 aa0.34□□□□□ -2.36
CBX3P9-201ENST00000402326 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 GVQW2A0A096LPI5 108 aaPredicted RBP0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 TRBV7-1A0A0A6YYK4 115 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 NDUFB6O95139 128 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 HIST1H1DP16402 221 aaKnown RBP0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 UBE2D1P51668 147 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 PDCD10Q9BUL8 212 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 PAIP2BQ9ULR5 123 aaKnown RBP0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 V9GYV3 84 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 ARFGEF1Q9Y6D6 1849 aa0.33□□□□□ -2.36
CBX3P9-201ENST00000402326 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 CLPSL1A2RUU4 121 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 FAM25AB3EWG3 89 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 FAM25CB3EWG5 89 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 FAM25GB3EWG6 89 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 CBLN1P23435 193 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 EDDM3BP56851 147 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 ARL11Q969Q4 196 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 PRR15LQ9BU68 103 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 SEC11CQ9BY50 192 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 LINC00470Q9BZP3 86 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 BPESC1Q9GZL8 116 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 CCDC167Q9P0B6 97 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 MEGF8Q7Z7M0 2845 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
CBX3P9-201ENST00000402326 DAPK1P53355 1430 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 NAV3Q8IVL0 2385 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 TRGV1A0A0A0MS02 117 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 MCRIP1C9JLW8 97 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 IFNA17P01571 189 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 ACYP2P14621 99 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 SMIM11BQ8TCY0 68 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 PROK2Q9HC23 129 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 CDK13Q14004 1512 aaKnown RBP0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
CBX3P9-201ENST00000402326 PARP14Q460N5 1801 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms