RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 SCRT2Q9NQ03 307 aa12.41□□□□□ -0.42
SMIM11A-202ENST00000399295 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 CBY3A6NI87 242 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 NTF3P20783 257 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 TWIST1Q15672 202 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
SMIM11A-202ENST00000399295 IGHV3-16A0A0C4DH30 117 aa12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 PHOX2AO14813 284 aa12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 APCSP02743 223 aa12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 RNASE3P12724 160 aaKnown RBP12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 HTN3P15516 51 aa12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
SMIM11A-202ENST00000399295 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
SMIM11A-202ENST00000399295 LY6G6CO95867 125 aa12.37□□□□□ -0.43
SMIM11A-202ENST00000399295 TRGC1P0CF51 173 aa12.37□□□□□ -0.43
SMIM11A-202ENST00000399295 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
SMIM11A-202ENST00000399295 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
SMIM11A-202ENST00000399295 RYR2Q92736 4967 aa12.37□□□□□ -0.43
SMIM11A-202ENST00000399295 NXPH4O95158 308 aa12.36□□□□□ -0.43
SMIM11A-202ENST00000399295 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
SMIM11A-202ENST00000399295 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
SMIM11A-202ENST00000399295 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 DAZ2Q13117 558 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 SPXQ9BT56 116 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 NDUFAF3Q9BU61 184 aa12.35□□□□□ -0.43
SMIM11A-202ENST00000399295 ATP5G1P05496 136 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 S100A6P06703 90 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 SSTP61278 116 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 SLAQ13239 276 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 FAM104BQ5XKR9 115 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 PTH2Q96A98 100 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 MDFICQ9P1T7 246 aa12.34□□□□□ -0.43
SMIM11A-202ENST00000399295 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 M0R381 172 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 GAGE7O76087 117 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 AP1S3Q96PC3 154 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 MSRB1Q9NZV6 116 aa12.33□□□□□ -0.44
SMIM11A-202ENST00000399295 F5H768 121 aa12.32□□□□□ -0.44
SMIM11A-202ENST00000399295 Q6ZTI0 123 aa12.32□□□□□ -0.44
SMIM11A-202ENST00000399295 HYDINQ4G0P3 5121 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 M0R2P5 195 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 PPBPP02775 128 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 MUC4Q99102 2169 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 VPS13DQ5THJ4 4388 aa12.3□□□□□ -0.44
SMIM11A-202ENST00000399295 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 SMIM17P0DL12 118 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 EVI2AP22794 236 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 SRIP30626 198 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 KIAA1644Q3SXP7 199 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 AMN1Q8IY45 258 aa12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
SMIM11A-202ENST00000399295 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 RAB4AP20338 218 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 NDUFA6P56556 154 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 Q0VG73 95 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
SMIM11A-202ENST00000399295 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 RNF185Q96GF1 192 aa12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 LAMTOR2Q9Y2Q5 125 aa12.27□□□□□ -0.45
SMIM11A-202ENST00000399295 A8MWV9 139 aa12.26□□□□□ -0.45
SMIM11A-202ENST00000399295 CKS2P33552 79 aa12.26□□□□□ -0.45
SMIM11A-202ENST00000399295 C15orf53Q8NAA6 179 aa12.26□□□□□ -0.45
SMIM11A-202ENST00000399295 P0DMU3 169 aa12.25□□□□□ -0.45
SMIM11A-202ENST00000399295 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms