RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CCL21O00585 134 aa10.52□□□□□ -0.73
APOB-202ENST00000399256 SVIPQ8NHG7 77 aa10.52□□□□□ -0.73
APOB-202ENST00000399256 ZNRF2Q8NHG8 242 aa10.52□□□□□ -0.73
APOB-202ENST00000399256 USP24Q9UPU5 2620 aa10.52□□□□□ -0.73
APOB-202ENST00000399256 OVOL1O14753 267 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 SLC25A29Q8N8R3 303 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 PPP1R17O96001 155 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 IGHV1-69DA0A0B4J2H0 117 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 F5H697 171 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 SUMO4Q6EEV6 95 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 TRPT1Q86TN4 253 aaKnown RBP10.51□□□□□ -0.73
APOB-202ENST00000399256 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
APOB-202ENST00000399256 MUC4Q99102 2169 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
APOB-202ENST00000399256 LINC00315P59091 139 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 C9JAW5 83 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 ADORA2A-AS1P86434 159 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 KIF25-AS1Q9Y6Z4 181 aa10.5□□□□□ -0.73
APOB-202ENST00000399256 ZFHX3Q15911 3703 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 J3QQQ9 107 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 SOCS3O14543 225 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
APOB-202ENST00000399256 UBE2E1P51965 193 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 A4D1N5 150 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 SLC25A20O43772 301 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 C5orf56Q8N8D9 126 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 AMELXQ99217 191 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 OPRPNQ99935 248 aaPredicted RBP10.49□□□□□ -0.73
APOB-202ENST00000399256 TRAV41A0A0B4J266 112 aa10.49□□□□□ -0.73
APOB-202ENST00000399256 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
APOB-202ENST00000399256 EIF4EBP3O60516 100 aaPredicted RBP10.48□□□□□ -0.73
APOB-202ENST00000399256 SRD5A1P18405 259 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 VCX2Q9H322 139 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 ZNF256Q9Y2P7 627 aaPredicted RBP10.48□□□□□ -0.73
APOB-202ENST00000399256 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 IGSF10Q6WRI0 2623 aa10.48□□□□□ -0.73
APOB-202ENST00000399256 SPTBN1Q01082 2364 aaKnown RBP10.47□□□□□ -0.73
APOB-202ENST00000399256 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 VCYO14598 125 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 FBXL19-AS1Q494R0 122 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 ZNF876PQ49A33 203 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 A0A087WW49 117 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
APOB-202ENST00000399256 TEX29Q8N6K0 151 aa10.46□□□□□ -0.73
APOB-202ENST00000399256 NXPH4O95158 308 aa10.46□□□□□ -0.74
APOB-202ENST00000399256 SS18L2Q9UHA2 77 aa10.46□□□□□ -0.74
APOB-202ENST00000399256 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 TMEM262E9PQX1 116 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 NPFFO15130 113 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 ELANEP08246 267 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 Q1RN00 199 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 FAM223AQ8IWN6 122 aa10.45□□□□□ -0.74
APOB-202ENST00000399256 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
APOB-202ENST00000399256 MUSTN1Q8IVN3 82 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 TMEM263Q8WUH6 116 aaKnown RBP10.44□□□□□ -0.74
APOB-202ENST00000399256 HIVEP3Q5T1R4 2406 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 NDUFA4O00483 81 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 APRG1Q8IVJ8 170 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 BEX4Q9NWD9 120 aaPredicted RBP10.44□□□□□ -0.74
APOB-202ENST00000399256 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
APOB-202ENST00000399256 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
APOB-202ENST00000399256 GNLYP22749 145 aa10.43□□□□□ -0.74
APOB-202ENST00000399256 CITED1Q99966 193 aa10.43□□□□□ -0.74
APOB-202ENST00000399256 ZNF580Q9UK33 172 aa10.43□□□□□ -0.74
APOB-202ENST00000399256 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 LEPROTO15243 131 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 EDN2P20800 178 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 ZNF56Q15929 161 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 RHPN1-AS1Q9BWJ2 59 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 MOB4Q9Y3A3 225 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 C19orf54Q5BKX5 351 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 A0A1W2PPR1 153 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 CRLF1O75462 422 aa10.42□□□□□ -0.74
APOB-202ENST00000399256 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
APOB-202ENST00000399256 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
APOB-202ENST00000399256 KLLNB2CW77 178 aa10.41□□□□□ -0.74
APOB-202ENST00000399256 B5MCH6 92 aa10.41□□□□□ -0.74
APOB-202ENST00000399256 Q8N1Y9 231 aa10.41□□□□□ -0.74
APOB-202ENST00000399256 UBTD1Q9HAC8 227 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms