RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 F8VRH5 84 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DEFB131AP59861 70 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 HSD52Q0P140 79 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 TMEM97Q5BJF2 176 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 C16orf95Q9H693 158 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 VPS13CQ709C8 3753 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SUMO4Q6EEV6 95 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
HLA-DQB1-204ENST00000399084 POLQO75417 2590 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DOPEY2Q9Y3R5 2298 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 TRAV12-2A0A075B6T6 113 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 F5H697 171 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 IGKV3-20P01619 116 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DEFB136Q30KP8 78 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 PAPPA-AS1Q5QFB9 102 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 MUC4Q99102 2169 aa13.09□□□□□ -0.31
HLA-DQB1-204ENST00000399084 CRYGDP07320 174 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 FHL3Q13643 280 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TMEM141Q96I45 108 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TMEM160Q9NX00 188 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 MRPL35Q9NZE8 188 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 A6NDN8 102 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 RNASE1P07998 156 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 NMUP48645 174 aa13.08□□□□□ -0.32
HLA-DQB1-204ENST00000399084 CBY3A6NI87 242 aa13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 SPRY2O43597 315 aa13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZNF876PQ49A33 203 aa13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZC2HC1BQ5TFG8 222 aa13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 CHTOPQ9Y3Y2 248 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-204ENST00000399084 M0QY20 66 aa13.06□□□□□ -0.32
HLA-DQB1-204ENST00000399084 RHOHQ15669 191 aa13.06□□□□□ -0.32
HLA-DQB1-204ENST00000399084 RAX2Q96IS3 184 aa13.06□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TIMM17AQ99595 171 aa13.06□□□□□ -0.32
HLA-DQB1-204ENST00000399084 UNC79Q9P2D8 2635 aa13.06□□□□□ -0.32
HLA-DQB1-204ENST00000399084 SDHAF1A6NFY7 115 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 MAP6D1Q9H9H5 199 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 A0A087WWL8 130 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 KNCNA6PVL3 124 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 A8MWV9 139 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 SPXQ9BT56 116 aa13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TSSC4Q9Y5U2 329 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TEX15Q9BXT5 2789 aa13.04□□□□□ -0.32
HLA-DQB1-204ENST00000399084 KRTAP1-1Q07627 177 aa13.04□□□□□ -0.32
HLA-DQB1-204ENST00000399084 JPT2Q9H910 190 aa13.04□□□□□ -0.32
HLA-DQB1-204ENST00000399084 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
HLA-DQB1-204ENST00000399084 M0R2P5 195 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 CCL24O00175 119 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 UBE2V1Q13404 147 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZNF56Q15929 161 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TAL2Q16559 108 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 BAALCQ8WXS3 180 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ABCA12Q86UK0 2595 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 APCP25054 2843 aa13.03□□□□□ -0.32
HLA-DQB1-204ENST00000399084 CENPEQ02224 2701 aa13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 IGIPA6NJ69 53 aa13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 CD300EQ496F6 205 aaPredicted RBP13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZNF418Q8TF45 676 aaPredicted RBP13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 TP73-AS1Q9UF72 201 aa13.02□□□□□ -0.32
HLA-DQB1-204ENST00000399084 ZANQ9Y493 2812 aa13.02□□□□□ -0.33
HLA-DQB1-204ENST00000399084 FAM74A4Q5TZK3 123 aa13.02□□□□□ -0.33
HLA-DQB1-204ENST00000399084 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
HLA-DQB1-204ENST00000399084 ESM1Q9NQ30 184 aa13.02□□□□□ -0.33
HLA-DQB1-204ENST00000399084 MXRA5Q9NR99 2828 aa13.01□□□□□ -0.33
HLA-DQB1-204ENST00000399084 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
HLA-DQB1-204ENST00000399084 INSP01308 110 aa13.01□□□□□ -0.33
HLA-DQB1-204ENST00000399084 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
HLA-DQB1-204ENST00000399084 H3BRM9 83 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 I3L3M4 83 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RHODO00212 210 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 PMVKQ15126 192 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 FAM110AQ9BQ89 295 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 ZFHX3Q15911 3703 aa13□□□□□ -0.33
HLA-DQB1-204ENST00000399084 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 NDUFA7O95182 113 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 LINC01006Q8NI28 216 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 TP53TG1Q9Y2A0 90 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RBMY1BA6NDE4 496 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RBMY1EA6NEQ0 496 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 NPSP0C0P6 89 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RBMY1DP0C7P1 496 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RBMY1A1P0DJD3 496 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 RBMY1CP0DJD4 496 aa12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms