RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C19orf84I3L1E1 186 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 SAA4P35542 130 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 ORMDL2Q53FV1 153 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 IGLV2-11P01706 119 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 IGKCP01834 107 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 FUSP35637 526 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMAD4-202ENST00000398417 SPCS1Q9Y6A9 102 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV2-70DA0A0C4DH43 119 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 OOSP1A8MZH6 123 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 CD5LO43866 347 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 SEC11AP67812 179 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 TMEM126AQ9H061 195 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 ODF3BA8MYP8 253 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 FSTL3O95633 263 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 BVES-AS1Q5T3Y7 98 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 NXT2Q9NPJ8 142 aaKnown RBP3.83□□□□□ -1.8
SMAD4-202ENST00000398417 TRGV2A0A075B6R0 118 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 K7EP13 123 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 PAX8Q06710 450 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 WFDC9Q8NEX5 89 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 PEF1Q9UBV8 284 aaKnown RBP3.82□□□□□ -1.8
SMAD4-202ENST00000398417 SONP18583 2426 aaKnown RBP3.82□□□□□ -1.8
SMAD4-202ENST00000398417 FAM159AQ6UWV7 190 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 LY6G5BQ8NDX9 201 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 SCRT2Q9NQ03 307 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 TNFRSF18Q9Y5U5 241 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 DLX4Q92988 240 aaPredicted RBP3.82□□□□□ -1.8
SMAD4-202ENST00000398417 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 SMIM13P0DJ93 91 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV3-73A0A0B4J1V6 119 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 Q8N8P6 123 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 KALRNO60229 2985 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 FOXE3Q13461 319 aa3.82□□□□□ -1.8
SMAD4-202ENST00000398417 TRBV6-1A0A0K0K1D8 114 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 GAGE12BA1L429 117 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 OVOL3O00110 214 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 GAS8-AS1O95177 125 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 H3BUX3 64 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 C9orf47Q6ZRZ4 202 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
SMAD4-202ENST00000398417 KIR2DL4Q99706 377 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 IGF1P05019 195 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 ZC2HC1BQ5TFG8 222 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 A0A0B4J2C4 111 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 PAX4O43316 350 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 NDUFS5O43920 106 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 COX8AP10176 69 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 HSD52Q0P140 79 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 LGALS9BQ3B8N2 356 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 LGALS9CQ6DKI2 356 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 SVEP1Q4LDE5 3571 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 Q6ZQT7 251 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 RMI2Q96E14 147 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 XGP55808 180 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 RHPN1-AS1Q9BWJ2 59 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 C11orf21Q9P2W6 132 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 POLQO75417 2590 aa3.81□□□□□ -1.8
SMAD4-202ENST00000398417 PRB1P04280 392 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 CXCL5P42830 114 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 KIR3DS1Q14943 382 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 GNRH2O43555 120 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 PAX2Q02962 417 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 SLC25A29Q8N8R3 303 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 MAPK1IP1LQ8NDC0 245 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 OVOL1O14753 267 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 MRPS12O15235 138 aaKnown RBP3.8□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV1-69P01742 117 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 SRSF1Q07955 248 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMAD4-202ENST00000398417 Q96MF0 132 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 ZNF469Q96JG9 3925 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-202ENST00000398417 PRRC2CQ9Y520 2896 aaKnown RBP3.8□□□□□ -1.8
SMAD4-202ENST00000398417 C9orf139Q6ZV77 190 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 TRBV20-1A0A075B6N2 111 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 A0A0U1RRA0 63 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 IGLC6P0CF74 106 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV4-38-2P0DP08 117 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 CASC2Q6XLA1 102 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV4-61A0A0C4DH41 118 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 PLA2G1BP04054 148 aaKnown RBP3.8□□□□□ -1.8
SMAD4-202ENST00000398417 CLUHP3Q96NS8 147 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 CSTL1Q9H114 145 aa3.8□□□□□ -1.8
SMAD4-202ENST00000398417 CPAMD8Q8IZJ3 1885 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 PCSK5Q92824 1860 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-202ENST00000398417 DEFB125Q8N687 156 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-202ENST00000398417 ACANP16112 2415 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 A0A087WWL8 130 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 TRBV12-3P01733 135 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 PDE6HQ13956 83 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 C11orf71Q6IPW1 123 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 JMJD8Q96S16 334 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 SMIM20Q8N5G0 67 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms