RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PXDNQ92626 1479 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 MBD5Q9P267 1494 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 LMO7Q8WWI1 1683 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 NWD2Q9ULI1 1742 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 COL14A1Q05707 1796 aaKnown RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 BORCS7-ASMTA0A0B4J1R7 106 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 TMEM30CPA0ZSE6 113 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 A6NN06 94 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 PLXNC1O60486 1568 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 CPDO75976 1380 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 OR2H2O95918 312 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 IGHV3-30P01768 117 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 TFF1P04155 84 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 GYPBP06028 91 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 DBIP07108 87 aaKnown RBP0.51□□□□□ -2.33
CD47-203ENST00000398258 IGHV3-30-5P0DP03 117 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 MRC1P22897 1456 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 CKS1BP61024 79 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 SCN7AQ01118 1682 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 HIST1H1AQ02539 215 aaPredicted RBP0.51□□□□□ -2.33
CD47-203ENST00000398258 CPSF1Q10570 1443 aaKnown RBP0.51□□□□□ -2.33
CD47-203ENST00000398258 ALX1Q15699 326 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 CCSMST1Q4G0I0 132 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 PLCH1Q4KWH8 1693 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 LYPD5Q6UWN5 251 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 TMEM91Q6ZNR0 172 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 IDO2Q6ZQW0 420 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 PKD1L3Q7Z443 1732 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 UBR1Q8IWV7 1749 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 OR8J3Q8NGG0 315 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 MAFIPQ8WZ33 124 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 ALS2Q96Q42 1657 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 CCL19Q99731 98 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 DUOX2Q9NRD8 1548 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 SPANXCQ9NY87 97 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 GSKIPQ9P0R6 139 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 DNAJC15Q9Y5T4 150 aa0.51□□□□□ -2.33
CD47-203ENST00000398258 ZNF462Q96JM2 2506 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 CASZ1Q86V15 1759 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 NRAPQ86VF7 1730 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 TNS1Q9HBL0 1735 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 MYO5CQ9NQX4 1742 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 MARF1Q9Y4F3 1742 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 ZNF469Q96JG9 3925 aaPredicted RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 TRAV17A0A0B4J275 112 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 LOC101927531A0A1B0GV80 90 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 CD3DP04234 171 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 HLA-DRB4P13762 266 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 COX6B1P14854 86 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 HIST1H1BP16401 226 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 RHOHQ15669 191 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 CLLU1Q5K131 121 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 Q6ZQY7 126 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 OR4S1Q8NGB4 309 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 SMIM3Q9BZL3 60 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 METTL1Q9UBP6 276 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 HLA-DRB4X5D2U9 266 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 ZDBF2Q9HCK1 2354 aa0.5□□□□□ -2.33
CD47-203ENST00000398258 XRN1Q8IZH2 1706 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 PARP4Q9UKK3 1724 aaKnown RBP0.5□□□□□ -2.33
CD47-203ENST00000398258 LAMC1P11047 1609 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 EIF2AK4Q9P2K8 1649 aaKnown RBP0.49□□□□□ -2.33
CD47-203ENST00000398258 VPS8Q8N3P4 1428 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 IBTKQ9P2D0 1353 aaPredicted RBP0.49□□□□□ -2.33
CD47-203ENST00000398258 PTPRFP10586 1907 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 A0A0G2JMM0 328 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 PNMA8CA0A1B0GUJ8 204 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 K7EIL1 84 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 TPST1O60507 370 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 KDELR1P24390 212 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 AKR1D1P51857 326 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 LINC00208Q96KT6 92 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 TJP1Q07157 1748 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 USP54Q70EL1 1684 aa0.49□□□□□ -2.33
CD47-203ENST00000398258 PAPPA2Q9BXP8 1791 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 M0R129 80 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 IGF2P01344 180 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 POLR2JP52435 117 aaKnown RBP0.48□□□□□ -2.33
CD47-203ENST00000398258 SPCS2Q15005 226 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 ZNF56Q15929 161 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 ASB16-AS1Q495Z4 193 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 MORN2Q502X0 79 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 XAF1Q6GPH4 301 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 SLC25A26Q70HW3 274 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 SNX29P2Q8IUI4 249 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 ATOH7Q8N100 152 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 SLC35B3Q9H1N7 401 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 ATG5Q9H1Y0 275 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 LSM2Q9Y333 95 aaKnown RBP0.48□□□□□ -2.33
CD47-203ENST00000398258 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms