RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 F8VRH5 84 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 GFI1BQ5VTD9 330 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 RASL10AQ92737 203 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 CA1P00915 261 aaPredicted RBP4.4□□□□□ -1.71
PTPRD-206ENST00000397617 MGPP08493 103 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 RNF223E7ERA6 249 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 CCL25O15444 150 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV3-53P01767 116 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 CFAP161Q6P656 301 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 CFAP47Q6ZTR5 3102 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 INSP01308 110 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 Q6ZVH6 145 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.71
PTPRD-206ENST00000397617 KLK15Q9H2R5 256 aa4.4□□□□□ -1.71
PTPRD-206ENST00000397617 EVI2AP22794 236 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 MRPL51Q4U2R6 128 aaKnown RBP4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TMEM219Q86XT9 240 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF664Q8N3J9 261 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 KIR2DL5BQ8NHK3 375 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 Q96MF0 132 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV3OR16-10A0A075B7F0 116 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TEX48A0A1B0GUV7 120 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 H3BMM0 161 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 GDF5OSQ5U4N7 250 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 UNQ9165/PRO28630Q6UXU0 137 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 MUC7Q8TAX7 377 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 PGLYRP4Q96LB8 373 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 YAE1D1Q9NRH1 226 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TNFRSF18Q9Y5U5 241 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 A0A1B0GV90 55 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 FBLN7Q53RD9 439 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TCTEX1D4Q5JR98 221 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 ZFAND6Q6FIF0 208 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 CRPP02741 224 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 RNASE4P34096 147 aaKnown RBP4.39□□□□□ -1.71
PTPRD-206ENST00000397617 PROK1P58294 105 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 VWFP04275 2813 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 LAGE3Q14657 143 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 IGLV2-18A0A075B6J9 118 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 H7C423 109 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 IGLV1-51P01701 117 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 RUSC1-AS1Q66K80 236 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 TRPT1Q86TN4 253 aaKnown RBP4.39□□□□□ -1.71
PTPRD-206ENST00000397617 WFDC9Q8NEX5 89 aa4.39□□□□□ -1.71
PTPRD-206ENST00000397617 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 NRACQ8N912 160 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 DEFB114Q30KQ6 69 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 Q6ZSV7 163 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-206ENST00000397617 DAZ2Q13117 558 aaKnown RBP4.38□□□□□ -1.71
PTPRD-206ENST00000397617 D6R8Y8 96 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 COX8AP10176 69 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 SPATA45Q537H7 98 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 SH2D6Q7Z4S9 175 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 A0A0J9YXY3 114 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF80P51504 273 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-206ENST00000397617 DUX5Q96PT3 197 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
PTPRD-206ENST00000397617 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV1-24A0A0C4DH33 117 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-206ENST00000397617 HTN1P15515 57 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 SRD5A1P18405 259 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 C10orf126Q8N4M7 172 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 Q8N976 141 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 CSN3P07498 182 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 NDUFA11Q86Y39 141 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 RNF185Q96GF1 192 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 LINC00315P59091 139 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 TMEM61Q8N0U2 210 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 RNASE3P12724 160 aaKnown RBP4.37□□□□□ -1.71
PTPRD-206ENST00000397617 KRTAP1-1Q07627 177 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 TMEM95Q3KNT9 176 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-206ENST00000397617 NBEAL2Q6ZNJ1 2754 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
PTPRD-206ENST00000397617 TRBV20-1A0A075B6N2 111 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 EMP1P54849 157 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 HSD52Q0P140 79 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 DPM2O94777 84 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 APELAP0DMC3 54 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
PTPRD-206ENST00000397617 ZNF56Q15929 161 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 GTSCR1Q86UQ5 136 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 A0A096LNJ9 63 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms