RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DEFA6Q01524 100 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 RASL10AQ92737 203 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 TRAV26-2A0A0B4J265 109 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 IGHV3-53P01767 116 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 GATD1Q8NB37 220 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 DPH3P1Q9H4G8 78 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 SMKR1H3BMG3 65 aa15.14■□□□□ 0.01
CPNE1-204ENST00000397443 RAB4AP20338 218 aa15.14■□□□□ 0.01
CPNE1-204ENST00000397443 FAM222AQ5U5X8 452 aa15.14■□□□□ 0.01
CPNE1-204ENST00000397443 RNF185Q96GF1 192 aa15.14■□□□□ 0.01
CPNE1-204ENST00000397443 NACAE9PAV3 2078 aa15.14■□□□□ 0.01
CPNE1-204ENST00000397443 MEGF8Q7Z7M0 2845 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 TRGV2A0A075B6R0 118 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 C1orf196B1AJZ1 125 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 NCR2O95944 276 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 MRPL51Q4U2R6 128 aaKnown RBP15.13■□□□□ 0.01
CPNE1-204ENST00000397443 SPATA25Q9BR10 227 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 F5H697 171 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 CRYGDP07320 174 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 LGALS9BQ3B8N2 356 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 CFAP126Q5VTH2 177 aa15.13■□□□□ 0.01
CPNE1-204ENST00000397443 A8MWV9 139 aa15.12■□□□□ 0.01
CPNE1-204ENST00000397443 ZNF56Q15929 161 aa15.12■□□□□ 0.01
CPNE1-204ENST00000397443 PTH2Q96A98 100 aa15.12■□□□□ 0.01
CPNE1-204ENST00000397443 KIF25-AS1Q9Y6Z4 181 aa15.12■□□□□ 0.01
CPNE1-204ENST00000397443 D6R8Y8 96 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 PHOX2AO14813 284 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 GAS8-AS1O95177 125 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 POM121L12Q8N7R1 296 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 TM2D3Q9BRN9 247 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 CELA1Q9UNI1 258 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 OR4C5Q8NGB2 326 aa15.11■□□□□ 0.01
CPNE1-204ENST00000397443 SRIP30626 198 aa15.1■□□□□ 0.01
CPNE1-204ENST00000397443 CKS2P33552 79 aa15.1■□□□□ 0.01
CPNE1-204ENST00000397443 LINC00315P59091 139 aa15.1■□□□□ 0.01
CPNE1-204ENST00000397443 ZNF479Q96JC4 524 aa15.1■□□□□ 0.01
CPNE1-204ENST00000397443 DKK2Q9UBU2 259 aa15.1■□□□□ 0.01
CPNE1-204ENST00000397443 GATA1P15976 413 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-204ENST00000397443 PIK3CD-AS1Q5SR53 167 aa15.09■□□□□ 0.01
CPNE1-204ENST00000397443 RS1O15537 224 aa15.09■□□□□ 0.01
CPNE1-204ENST00000397443 A0A0J9YWU9 116 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 LYRM9A8MSI8 78 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BKO60814 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BJP06899 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BOP23527 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BBP33778 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BDP58876 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 RAB5BP61020 215 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BCP62807 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST2H2BEQ16778 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BHQ93079 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BNQ99877 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 HIST1H2BMQ99879 126 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 ZMAT4Q9H898 229 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 SUMO4Q6EEV6 95 aa15.07■□□□□ 0
CPNE1-204ENST00000397443 TRAV4A0A0B4J268 109 aa15.06■□□□□ 0
CPNE1-204ENST00000397443 UFSP1Q6NVU6 142 aa15.06■□□□□ 0
CPNE1-204ENST00000397443 Q6ZSN1 163 aa15.06■□□□□ 0
CPNE1-204ENST00000397443 ORMDL3Q8N138 153 aa15.06■□□□□ 0
CPNE1-204ENST00000397443 ALKBH7Q9BT30 221 aaPredicted RBP15.06■□□□□ 0
CPNE1-204ENST00000397443 SPART-AS1P0CW21 52 aa15.05■□□□□ 0
CPNE1-204ENST00000397443 DAD1P61803 113 aa15.05■□□□□ 0
CPNE1-204ENST00000397443 PRELID3AQ96N28 172 aa15.05■□□□□ 0
CPNE1-204ENST00000397443 B9D2Q9BPU9 175 aa15.05■□□□□ 0
CPNE1-204ENST00000397443 NDUFAF3Q9BU61 184 aa15.05■□□□□ 0
CPNE1-204ENST00000397443 IQCJQ1A5X6 159 aa15.04■□□□□ -0
CPNE1-204ENST00000397443 RPL39LQ96EH5 51 aaKnown RBP15.04■□□□□ -0
CPNE1-204ENST00000397443 HUWE1Q7Z6Z7 4374 aaKnown RBP15.04■□□□□ -0
CPNE1-204ENST00000397443 COL7A1Q02388 2944 aa15.04■□□□□ -0
CPNE1-204ENST00000397443 RHODO00212 210 aa15.04■□□□□ -0
CPNE1-204ENST00000397443 LINC00612Q8N6U2 182 aa15.04■□□□□ -0
CPNE1-204ENST00000397443 NPYP01303 97 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 P0DMU3 169 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 FAM231AP0DMU4 169 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 FAM231CP0DMU5 169 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 MRAP2Q96G30 205 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 U3KQK5 164 aa15.03■□□□□ -0
CPNE1-204ENST00000397443 PRKDCP78527 4128 aaKnown RBP15.03■□□□□ -0
CPNE1-204ENST00000397443 C11orf68Q9H3H3 251 aaKnown RBP15.02■□□□□ -0
CPNE1-204ENST00000397443 TRGV4A0A0C4DH28 118 aa15.02□□□□□ -0.01
CPNE1-204ENST00000397443 LOC389332A0A1B0GUA5 103 aa15.02□□□□□ -0.01
CPNE1-204ENST00000397443 ZFP2Q6ZN57 461 aa15.02□□□□□ -0.01
CPNE1-204ENST00000397443 TNFRSF6BO95407 300 aa15.01□□□□□ -0.01
CPNE1-204ENST00000397443 PPBPP02775 128 aa15.01□□□□□ -0.01
CPNE1-204ENST00000397443 DNAH9Q9NYC9 4486 aa15.01□□□□□ -0.01
CPNE1-204ENST00000397443 HTN3P15516 51 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 NDUFA6P56556 154 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 C18orf32Q8TCD1 76 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 Q9UF83 564 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 M0QY20 66 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 OR10J3Q5JRS4 329 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 NRACQ8N912 160 aa15□□□□□ -0.01
CPNE1-204ENST00000397443 C12orf74Q32Q52 190 aa14.98□□□□□ -0.01
CPNE1-204ENST00000397443 BAGE3Q86Y29 109 aa14.98□□□□□ -0.01
CPNE1-204ENST00000397443 STAB2Q8WWQ8 2551 aa14.98□□□□□ -0.01
CPNE1-204ENST00000397443 HOXA5P20719 270 aa14.98□□□□□ -0.01
CPNE1-204ENST00000397443 FHL2Q14192 279 aa14.98□□□□□ -0.01
CPNE1-204ENST00000397443 TEX48A0A1B0GUV7 120 aa14.97□□□□□ -0.01
CPNE1-204ENST00000397443 NANOS2P60321 138 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms