RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 K7EQD1 137 aa20.4■□□□□ 0.86
CHCHD4-202ENST00000396914 NXPH4O95158 308 aa20.4■□□□□ 0.86
CHCHD4-202ENST00000396914 RPL23P62829 140 aaKnown RBP20.4■□□□□ 0.86
CHCHD4-202ENST00000396914 C15orf54Q8N8G6 183 aa20.4■□□□□ 0.86
CHCHD4-202ENST00000396914 TRBV6-4A0A1B0GX49 114 aa20.39■□□□□ 0.85
CHCHD4-202ENST00000396914 CACNG7P62955 275 aa20.39■□□□□ 0.85
CHCHD4-202ENST00000396914 RHOHQ15669 191 aa20.39■□□□□ 0.85
CHCHD4-202ENST00000396914 A8MWL6 223 aa20.38■□□□□ 0.85
CHCHD4-202ENST00000396914 SMIM17P0DL12 118 aa20.37■□□□□ 0.85
CHCHD4-202ENST00000396914 Q6ZSN1 163 aa20.37■□□□□ 0.85
CHCHD4-202ENST00000396914 ISOC2Q96AB3 205 aa20.37■□□□□ 0.85
CHCHD4-202ENST00000396914 OSTCQ9NRP0 149 aa20.37■□□□□ 0.85
CHCHD4-202ENST00000396914 LINC00588Q9Y4M8 146 aa20.37■□□□□ 0.85
CHCHD4-202ENST00000396914 CRYGDP07320 174 aa20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 ESRGQ1W209 222 aa20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 UFSP1Q6NVU6 142 aa20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 NEGR1Q7Z3B1 354 aa20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 C14orf178Q8N769 122 aaPredicted RBP20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 AP1S3Q96PC3 154 aa20.36■□□□□ 0.85
CHCHD4-202ENST00000396914 ZNF56Q15929 161 aa20.35■□□□□ 0.85
CHCHD4-202ENST00000396914 MSRB1Q9NZV6 116 aa20.35■□□□□ 0.85
CHCHD4-202ENST00000396914 CT83Q5H943 113 aa20.34■□□□□ 0.85
CHCHD4-202ENST00000396914 GTSF1Q8WW33 167 aa20.34■□□□□ 0.85
CHCHD4-202ENST00000396914 F5H697 171 aa20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 NTF3P20783 257 aa20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 CTRLP40313 264 aa20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 FAM3BP58499 235 aaPredicted RBP20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 PGLYRP4Q96LB8 373 aa20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 RYR2Q92736 4967 aa20.33■□□□□ 0.84
CHCHD4-202ENST00000396914 VPS13DQ5THJ4 4388 aa20.32■□□□□ 0.84
CHCHD4-202ENST00000396914 RYR3Q15413 4870 aa20.32■□□□□ 0.84
CHCHD4-202ENST00000396914 IGLV2-18A0A075B6J9 118 aa20.32■□□□□ 0.84
CHCHD4-202ENST00000396914 TWIST1Q15672 202 aa20.32■□□□□ 0.84
CHCHD4-202ENST00000396914 OR10G8Q8NGN5 311 aa20.32■□□□□ 0.84
CHCHD4-202ENST00000396914 GAGE12JA6NER3 117 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 GAGE1Q13065 139 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 GAGE4Q13068 117 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 GAGE5Q13069 117 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 GAGE13Q4V321 117 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 LYPD5Q6UWN5 251 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 SH2D6Q7Z4S9 175 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 TSKUQ8WUA8 353 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 BORCS7Q96B45 105 aa20.3■□□□□ 0.84
CHCHD4-202ENST00000396914 M0R2N4 97 aa20.29■□□□□ 0.84
CHCHD4-202ENST00000396914 MGPP08493 103 aa20.29■□□□□ 0.84
CHCHD4-202ENST00000396914 TRGC1P0CF51 173 aa20.29■□□□□ 0.84
CHCHD4-202ENST00000396914 WDR73Q6P4I2 378 aa20.29■□□□□ 0.84
CHCHD4-202ENST00000396914 HYDINQ4G0P3 5121 aa20.29■□□□□ 0.84
CHCHD4-202ENST00000396914 RAB4BP61018 213 aa20.28■□□□□ 0.84
CHCHD4-202ENST00000396914 COMMD7Q86VX2 200 aa20.28■□□□□ 0.84
CHCHD4-202ENST00000396914 MRPS16Q9Y3D3 137 aaKnown RBP20.28■□□□□ 0.84
CHCHD4-202ENST00000396914 V9GYV3 84 aa20.28■□□□□ 0.84
CHCHD4-202ENST00000396914 UQCC3Q6UW78 93 aa20.27■□□□□ 0.84
CHCHD4-202ENST00000396914 ZNRF2Q8NHG8 242 aa20.27■□□□□ 0.83
CHCHD4-202ENST00000396914 HIGD1CA8MV81 97 aa20.26■□□□□ 0.83
CHCHD4-202ENST00000396914 EVI2AP22794 236 aa20.26■□□□□ 0.83
CHCHD4-202ENST00000396914 GFRA4Q9GZZ7 299 aa20.26■□□□□ 0.83
CHCHD4-202ENST00000396914 ATP6V0E2Q8NHE4 81 aa20.25■□□□□ 0.83
CHCHD4-202ENST00000396914 Q9H8V8 135 aa20.25■□□□□ 0.83
CHCHD4-202ENST00000396914 Q9UF83 564 aa20.25■□□□□ 0.83
CHCHD4-202ENST00000396914 SMIM15Q7Z3B0 74 aa20.24■□□□□ 0.83
CHCHD4-202ENST00000396914 CNFNQ9BYD5 112 aa20.24■□□□□ 0.83
CHCHD4-202ENST00000396914 KIF25-AS1Q9Y6Z4 181 aa20.24■□□□□ 0.83
CHCHD4-202ENST00000396914 DPH3P1Q9H4G8 78 aa20.23■□□□□ 0.83
CHCHD4-202ENST00000396914 FAM231BA6NCW3 169 aa20.22■□□□□ 0.83
CHCHD4-202ENST00000396914 FOXA3P55318 350 aaPredicted RBP20.22■□□□□ 0.83
CHCHD4-202ENST00000396914 UPK3BQ9BT76 320 aa20.22■□□□□ 0.83
CHCHD4-202ENST00000396914 RPL36AP83881 106 aaKnown RBP20.21■□□□□ 0.83
CHCHD4-202ENST00000396914 PNRC1Q12796 327 aaPredicted RBP20.21■□□□□ 0.83
CHCHD4-202ENST00000396914 RPL36ALQ969Q0 106 aaKnown RBP20.21■□□□□ 0.83
CHCHD4-202ENST00000396914 TRBV10-1A0A0K0K1A3 114 aa20.2■□□□□ 0.82
CHCHD4-202ENST00000396914 F8W036 122 aa20.2■□□□□ 0.82
CHCHD4-202ENST00000396914 A0A1B0GUT8 65 aa20.19■□□□□ 0.82
CHCHD4-202ENST00000396914 LINC00315P59091 139 aa20.19■□□□□ 0.82
CHCHD4-202ENST00000396914 NAT8BQ9UHF3 227 aa20.19■□□□□ 0.82
CHCHD4-202ENST00000396914 TMEM218A2RU14 115 aa20.19■□□□□ 0.82
CHCHD4-202ENST00000396914 GTSF1LQ9H1H1 148 aa20.19■□□□□ 0.82
CHCHD4-202ENST00000396914 LINC00862A6NCI5 91 aa20.18■□□□□ 0.82
CHCHD4-202ENST00000396914 NUP35Q8NFH5 326 aa20.18■□□□□ 0.82
CHCHD4-202ENST00000396914 H7C1H1 209 aa20.17■□□□□ 0.82
CHCHD4-202ENST00000396914 SIVA1O15304 175 aa20.17■□□□□ 0.82
CHCHD4-202ENST00000396914 SUMO4Q6EEV6 95 aa20.17■□□□□ 0.82
CHCHD4-202ENST00000396914 TRBV7-3A0A075B6L6 115 aa20.16■□□□□ 0.82
CHCHD4-202ENST00000396914 OR10J3Q5JRS4 329 aa20.16■□□□□ 0.82
CHCHD4-202ENST00000396914 KMT2AQ03164 3969 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 NBDYA0A0U1RRE5 68 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 SMIM27A0A1W2PRY6 76 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 PPP1R2P9O14990 202 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 LINC00694P0DN24 101 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 RIGQ13278 110 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 NEXN-AS1Q8NBZ9 246 aa20.15■□□□□ 0.82
CHCHD4-202ENST00000396914 TIRAPP58753 221 aa20.14■□□□□ 0.81
CHCHD4-202ENST00000396914 TRAV8-6A0A0B4J262 113 aa20.13■□□□□ 0.81
CHCHD4-202ENST00000396914 MT-ND4LP03901 98 aa20.13■□□□□ 0.81
CHCHD4-202ENST00000396914 ADCYAP1P18509 176 aa20.13■□□□□ 0.81
CHCHD4-202ENST00000396914 WFDC10BQ8IUB3 73 aa20.13■□□□□ 0.81
CHCHD4-202ENST00000396914 TNFRSF18Q9Y5U5 241 aa20.12■□□□□ 0.81
CHCHD4-202ENST00000396914 M0QY20 66 aa20.11■□□□□ 0.81
CHCHD4-202ENST00000396914 UBE2D3P61077 147 aa20.11■□□□□ 0.81
CHCHD4-202ENST00000396914 UBE2D2P62837 147 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms