RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MIFP14174 115 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 RITA1Q96K30 269 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 K7EQG2 157 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 NDUFB1O75438 58 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 K7EP13 123 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 ANKRD29Q8N6D5 301 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 KIR2DL5BQ8NHK3 375 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 SND1-IT1Q9HBX3 110 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 MBD6Q96DN6 1003 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 SPATA25Q9BR10 227 aa11.94□□□□□ -0.5
GNE-202ENST00000396594 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
GNE-202ENST00000396594 A4D1N5 150 aa11.93□□□□□ -0.5
GNE-202ENST00000396594 H3BT86 120 aa11.93□□□□□ -0.5
GNE-202ENST00000396594 AMTNQ6UX39 209 aa11.93□□□□□ -0.5
GNE-202ENST00000396594 A0A0J9YY99 117 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 F8W735 103 aaPredicted RBP11.92□□□□□ -0.5
GNE-202ENST00000396594 HILS1P60008 231 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 IGKV1D-37A0A075B6S9 117 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 CITED2Q99967 270 aaPredicted RBP11.92□□□□□ -0.5
GNE-202ENST00000396594 ZNF407Q9C0G0 2248 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
GNE-202ENST00000396594 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
GNE-202ENST00000396594 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
GNE-202ENST00000396594 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
GNE-202ENST00000396594 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
GNE-202ENST00000396594 BAALCQ8WXS3 180 aa11.91□□□□□ -0.5
GNE-202ENST00000396594 BRI3O95415 125 aa11.9□□□□□ -0.5
GNE-202ENST00000396594 MRGPRG-AS1Q2M3A8 158 aa11.9□□□□□ -0.5
GNE-202ENST00000396594 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.5
GNE-202ENST00000396594 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
GNE-202ENST00000396594 C9orf153Q5TBE3 101 aa11.9□□□□□ -0.5
GNE-202ENST00000396594 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
GNE-202ENST00000396594 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 GTSF1Q8WW33 167 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
GNE-202ENST00000396594 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
GNE-202ENST00000396594 NDUFA7O95182 113 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 Q6ZQT7 251 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 RTTNQ86VV8 2226 aa11.89□□□□□ -0.51
GNE-202ENST00000396594 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
GNE-202ENST00000396594 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
GNE-202ENST00000396594 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 KIAA2026Q5HYC2 2103 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 HIST2H2BCQ6DN03 193 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
GNE-202ENST00000396594 NAA38Q9BRA0 125 aaKnown RBP11.88□□□□□ -0.51
GNE-202ENST00000396594 HAMPP81172 84 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 SNRNP200O75643 2136 aaKnown RBP11.88□□□□□ -0.51
GNE-202ENST00000396594 Q8N6K4 173 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 TRBV6-4A0A1B0GX49 114 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 MORN5Q5VZ52 161 aa11.88□□□□□ -0.51
GNE-202ENST00000396594 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
GNE-202ENST00000396594 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
GNE-202ENST00000396594 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
GNE-202ENST00000396594 A0A0B4J2C4 111 aa11.87□□□□□ -0.51
GNE-202ENST00000396594 A0A0J9YXV3 536 aa11.87□□□□□ -0.51
GNE-202ENST00000396594 ADAMTS9Q9P2N4 1935 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 IGLL5B9A064 214 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 TMEM256-PLSCR3K7ERE1 68 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 PRB1P04280 392 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
GNE-202ENST00000396594 MED12Q93074 2177 aa11.85□□□□□ -0.51
GNE-202ENST00000396594 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
GNE-202ENST00000396594 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
GNE-202ENST00000396594 H3BMG7 143 aa11.85□□□□□ -0.51
GNE-202ENST00000396594 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
GNE-202ENST00000396594 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 TRACP01848 142 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 ZNF843Q8N446 348 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 TMEM258P61165 79 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 PRR31Q5SQ13 230 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
GNE-202ENST00000396594 A0A096LPF7 62 aa11.83□□□□□ -0.52
GNE-202ENST00000396594 CRIP2P52943 208 aaPredicted RBP11.83□□□□□ -0.52
GNE-202ENST00000396594 ZFAND3Q9H8U3 227 aa11.83□□□□□ -0.52
GNE-202ENST00000396594 RS1O15537 224 aa11.83□□□□□ -0.52
GNE-202ENST00000396594 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
GNE-202ENST00000396594 PCNX2A6NKB5 2137 aa11.83□□□□□ -0.52
GNE-202ENST00000396594 EML6Q6ZMW3 1958 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 UBE2AP49459 152 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 ODF1Q14990 250 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 ETDBQ3ZM63 59 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 Q9HAA7 133 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 DOCK9Q9BZ29 2069 aa11.82□□□□□ -0.52
GNE-202ENST00000396594 ATOX1O00244 68 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms