RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 FGF6P10767 208 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-202ENST00000396033 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 CITED2Q99967 270 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-202ENST00000396033 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 TMEM160Q9NX00 188 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 AGRNO00468 2067 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 G3V4G9 280 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 HILS1P60008 231 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 MRAP2Q96G30 205 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 CCL24O00175 119 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 NRACQ8N912 160 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 SORL1Q92673 2214 aa9.01□□□□□ -0.97
ITGB1-202ENST00000396033 MGPP08493 103 aa9□□□□□ -0.97
ITGB1-202ENST00000396033 DEFB114Q30KQ6 69 aa9□□□□□ -0.97
ITGB1-202ENST00000396033 AMTNQ6UX39 209 aa9□□□□□ -0.97
ITGB1-202ENST00000396033 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
ITGB1-202ENST00000396033 FHL3Q13643 280 aa9□□□□□ -0.97
ITGB1-202ENST00000396033 CD300EQ496F6 205 aaPredicted RBP9□□□□□ -0.97
ITGB1-202ENST00000396033 NXPH4O95158 308 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 Q8N8P6 123 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 HIVEP2P31629 2446 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 LINC01546A6NGU7 62 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 NEGR1Q7Z3B1 354 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
ITGB1-202ENST00000396033 LY6G6DO95868 133 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 IGHV3-16A0A0C4DH30 117 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 H3BMM0 161 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 Q8N1Y9 231 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 NOTCH2Q04721 2471 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 SETD2Q9BYW2 2564 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-202ENST00000396033 IGLV2-18A0A075B6J9 118 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
ITGB1-202ENST00000396033 SPAG8Q99932 426 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-202ENST00000396033 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
ITGB1-202ENST00000396033 MUC4Q99102 2169 aa8.97□□□□□ -0.97
ITGB1-202ENST00000396033 FCER1GP30273 86 aa8.97□□□□□ -0.97
ITGB1-202ENST00000396033 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
ITGB1-202ENST00000396033 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
ITGB1-202ENST00000396033 PRSS47A8MTI9 375 aa8.96□□□□□ -0.97
ITGB1-202ENST00000396033 RASL10AQ92737 203 aa8.96□□□□□ -0.97
ITGB1-202ENST00000396033 RBMY1BA6NDE4 496 aaKnown RBP8.96□□□□□ -0.98
ITGB1-202ENST00000396033 RBMY1EA6NEQ0 496 aaKnown RBP8.96□□□□□ -0.98
ITGB1-202ENST00000396033 HSBP1L1C9JCN9 74 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 RBMY1DP0C7P1 496 aaKnown RBP8.96□□□□□ -0.98
ITGB1-202ENST00000396033 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
ITGB1-202ENST00000396033 A8MTW9 85 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 TMEM158Q8WZ71 300 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 SMIM2Q9BVW6 85 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 JPT2Q9H910 190 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 WNK1Q9H4A3 2382 aa8.96□□□□□ -0.98
ITGB1-202ENST00000396033 NDUFA7O95182 113 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 RBMY1A1P0DJD3 496 aaKnown RBP8.95□□□□□ -0.98
ITGB1-202ENST00000396033 RBMY1CP0DJD4 496 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 TCTAP57738 103 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 LAGE3Q14657 143 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 RBMY1FQ15415 496 aaKnown RBP8.95□□□□□ -0.98
ITGB1-202ENST00000396033 SLC25A34Q6PIV7 304 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 SYT8Q8NBV8 401 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 ZNF256Q9Y2P7 627 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-202ENST00000396033 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 TRAV25A0A0B4J276 109 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 SUMO2P61956 95 aaKnown RBP8.95□□□□□ -0.98
ITGB1-202ENST00000396033 A0A087WWL8 130 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
ITGB1-202ENST00000396033 HTN1P15515 57 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 LGALS9BQ3B8N2 356 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 NSUN5P1Q3KNT7 163 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
ITGB1-202ENST00000396033 CIDEAO60543 219 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 LINC00315P59091 139 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 FAM74A4Q5TZK3 123 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 PPP1R17O96001 155 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 PROK1P58294 105 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 ODF3L2Q3SX64 289 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 F5H697 171 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 COX8AP10176 69 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 SUMO4Q6EEV6 95 aa8.93□□□□□ -0.98
ITGB1-202ENST00000396033 K7ERU9 68 aa8.92□□□□□ -0.98
ITGB1-202ENST00000396033 INAFM1C9JVW0 142 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 ADARB2-AS1A8MUL3 147 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 H3BUT2 72 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 K7EMI3 77 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 ZNF56Q15929 161 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 ZNF876PQ49A33 203 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 ORMDL2Q53FV1 153 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 STHQ8IWL8 128 aa8.91□□□□□ -0.98
ITGB1-202ENST00000396033 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
ITGB1-202ENST00000396033 K7EP34 96 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms