RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SIVA1O15304 175 aa13.78□□□□□ -0.2
SIL1-202ENST00000394817 NPSP0C0P6 89 aa13.78□□□□□ -0.2
SIL1-202ENST00000394817 JPT2Q9H910 190 aa13.78□□□□□ -0.2
SIL1-202ENST00000394817 A0A087WX48 190 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 A8MTW9 85 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 NMUP48645 174 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 TCTAP57738 103 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 SMR3AQ99954 134 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 MDFICQ9P1T7 246 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 MTORP42345 2549 aa13.77□□□□□ -0.21
SIL1-202ENST00000394817 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 Q6ZSV7 163 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 CSTL1Q9H114 145 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
SIL1-202ENST00000394817 KHDC1LQ5JSQ8 128 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 Q6ZVH6 145 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 PCP2Q8IVA1 136 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 SYT8Q8NBV8 401 aa13.76□□□□□ -0.21
SIL1-202ENST00000394817 NF1P21359 2839 aa13.75□□□□□ -0.21
SIL1-202ENST00000394817 OTOGQ6ZRI0 2925 aa13.75□□□□□ -0.21
SIL1-202ENST00000394817 HLA-DRB4P13762 266 aa13.75□□□□□ -0.21
SIL1-202ENST00000394817 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
SIL1-202ENST00000394817 HLA-DRB4X5D2U9 266 aa13.75□□□□□ -0.21
SIL1-202ENST00000394817 A0A087WWL8 130 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 TMEM61Q8N0U2 210 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 DUX3Q96PT4 197 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 PLNP26678 52 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 DEFB131AP59861 70 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 TMEM97Q5BJF2 176 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 ZC2HC1BQ5TFG8 222 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 C2orf66Q6UXQ4 117 aa13.74□□□□□ -0.21
SIL1-202ENST00000394817 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
SIL1-202ENST00000394817 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
SIL1-202ENST00000394817 KNCNA6PVL3 124 aa13.73□□□□□ -0.21
SIL1-202ENST00000394817 TAX1BP3O14907 124 aa13.73□□□□□ -0.21
SIL1-202ENST00000394817 POLR2KP53803 58 aaKnown RBP13.73□□□□□ -0.21
SIL1-202ENST00000394817 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
SIL1-202ENST00000394817 F8VRH5 84 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 SEC11AP67812 179 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 TRBV6-5A0A0K0K1A5 114 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 H3BMM0 161 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 H7C1H1 209 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 HSD52Q0P140 79 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 HIST2H2BDQ6DRA6 164 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 NEXN-AS1Q8NBZ9 246 aa13.72□□□□□ -0.21
SIL1-202ENST00000394817 RBMY1A1P0DJD3 496 aaKnown RBP13.71□□□□□ -0.21
SIL1-202ENST00000394817 RBMY1CP0DJD4 496 aa13.71□□□□□ -0.21
SIL1-202ENST00000394817 RBMY1FQ15415 496 aaKnown RBP13.71□□□□□ -0.21
SIL1-202ENST00000394817 DYNLRB2Q8TF09 96 aa13.71□□□□□ -0.21
SIL1-202ENST00000394817 LINC01549A6NIU2 74 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 F5H697 171 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 CRYGDP07320 174 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 FAM74A4Q5TZK3 123 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 ERASQ7Z444 233 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 NEGR1Q7Z3B1 354 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
SIL1-202ENST00000394817 RBMY1BA6NDE4 496 aaKnown RBP13.69□□□□□ -0.22
SIL1-202ENST00000394817 RBMY1EA6NEQ0 496 aaKnown RBP13.69□□□□□ -0.22
SIL1-202ENST00000394817 VCYO14598 125 aa13.69□□□□□ -0.22
SIL1-202ENST00000394817 RBMY1DP0C7P1 496 aaKnown RBP13.69□□□□□ -0.22
SIL1-202ENST00000394817 DEFB114Q30KQ6 69 aa13.69□□□□□ -0.22
SIL1-202ENST00000394817 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
SIL1-202ENST00000394817 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
SIL1-202ENST00000394817 CYSLTR1Q9Y271 337 aa13.69□□□□□ -0.22
SIL1-202ENST00000394817 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
SIL1-202ENST00000394817 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 SDHAF1A6NFY7 115 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 CBY3A6NI87 242 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 ZNF56Q15929 161 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 KIR2DL4Q99706 377 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
SIL1-202ENST00000394817 M0QY20 66 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 ZNF876PQ49A33 203 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 ZFP2Q6ZN57 461 aa13.68□□□□□ -0.22
SIL1-202ENST00000394817 LY6G6DO95868 133 aa13.67□□□□□ -0.22
SIL1-202ENST00000394817 FHL3Q13643 280 aa13.67□□□□□ -0.22
SIL1-202ENST00000394817 ZNF124Q15973 351 aa13.67□□□□□ -0.22
SIL1-202ENST00000394817 MORN3Q6PF18 240 aaPredicted RBP13.67□□□□□ -0.22
SIL1-202ENST00000394817 UBE2V1Q13404 147 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 SPAG8Q99932 426 aaPredicted RBP13.66□□□□□ -0.22
SIL1-202ENST00000394817 TTTY13Q9BZ97 58 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 RIPPLY3P57055 190 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 CD300EQ496F6 205 aaPredicted RBP13.66□□□□□ -0.22
SIL1-202ENST00000394817 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 TP53TG1Q9Y2A0 90 aa13.66□□□□□ -0.22
SIL1-202ENST00000394817 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
SIL1-202ENST00000394817 CCL25O15444 150 aa13.65□□□□□ -0.22
SIL1-202ENST00000394817 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
SIL1-202ENST00000394817 A6NDN8 102 aa13.64□□□□□ -0.23
SIL1-202ENST00000394817 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
SIL1-202ENST00000394817 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
SIL1-202ENST00000394817 PRSS29PA6NIE9 313 aa13.64□□□□□ -0.23
SIL1-202ENST00000394817 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
SIL1-202ENST00000394817 TRAV25A0A0B4J276 109 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms