RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
CCT4-201ENST00000394440 MDFIQ99750 246 aa10.94□□□□□ -0.66
CCT4-201ENST00000394440 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
CCT4-201ENST00000394440 LINC00173Q6ZV60 143 aa10.94□□□□□ -0.66
CCT4-201ENST00000394440 CBY1Q9Y3M2 126 aa10.94□□□□□ -0.66
CCT4-201ENST00000394440 CBY3A6NI87 242 aa10.93□□□□□ -0.66
CCT4-201ENST00000394440 INSP01308 110 aa10.93□□□□□ -0.66
CCT4-201ENST00000394440 JPT2Q9H910 190 aa10.93□□□□□ -0.66
CCT4-201ENST00000394440 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
CCT4-201ENST00000394440 TENM1Q9UKZ4 2725 aa10.92□□□□□ -0.66
CCT4-201ENST00000394440 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
CCT4-201ENST00000394440 RASL10AQ92737 203 aa10.92□□□□□ -0.66
CCT4-201ENST00000394440 Q8N8P6 123 aa10.92□□□□□ -0.66
CCT4-201ENST00000394440 SYT8Q8NBV8 401 aa10.92□□□□□ -0.66
CCT4-201ENST00000394440 MGPP08493 103 aa10.91□□□□□ -0.66
CCT4-201ENST00000394440 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
CCT4-201ENST00000394440 TMEM70Q9BUB7 260 aa10.91□□□□□ -0.66
CCT4-201ENST00000394440 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
CCT4-201ENST00000394440 SPATA12Q7Z6I5 190 aa10.9□□□□□ -0.66
CCT4-201ENST00000394440 ZNF747Q9BV97 191 aa10.9□□□□□ -0.66
CCT4-201ENST00000394440 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
CCT4-201ENST00000394440 HBDP02042 147 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 PRM2P04554 102 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 PKIAP61925 76 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 HSPB8Q9UJY1 196 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 NACAE9PAV3 2078 aa10.9□□□□□ -0.67
CCT4-201ENST00000394440 SYS1-DBNDD2H3BUS1 97 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 CRYGDP07320 174 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 ATRQ13535 2644 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 A0A087WWL8 130 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 GIG44P09565 113 aaPredicted RBP10.89□□□□□ -0.67
CCT4-201ENST00000394440 INSL3P51460 131 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 NUTF2P61970 127 aaKnown RBP10.89□□□□□ -0.67
CCT4-201ENST00000394440 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
CCT4-201ENST00000394440 LINC01587Q99440 93 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
CCT4-201ENST00000394440 VWFP04275 2813 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 HTN1P15515 57 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 PTH2Q96A98 100 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
CCT4-201ENST00000394440 PIK3CD-AS1Q5SR53 167 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
CCT4-201ENST00000394440 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
CCT4-201ENST00000394440 PPP1R17O96001 155 aa10.87□□□□□ -0.67
CCT4-201ENST00000394440 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
CCT4-201ENST00000394440 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
CCT4-201ENST00000394440 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
CCT4-201ENST00000394440 FCER1GP30273 86 aa10.86□□□□□ -0.67
CCT4-201ENST00000394440 M0R2P5 195 aa10.86□□□□□ -0.67
CCT4-201ENST00000394440 PET117Q6UWS5 81 aa10.86□□□□□ -0.67
CCT4-201ENST00000394440 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
CCT4-201ENST00000394440 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
CCT4-201ENST00000394440 FAM74A4Q5TZK3 123 aa10.85□□□□□ -0.67
CCT4-201ENST00000394440 SPXQ9BT56 116 aa10.85□□□□□ -0.67
CCT4-201ENST00000394440 VAMP8Q9BV40 100 aa10.85□□□□□ -0.67
CCT4-201ENST00000394440 AZU1P20160 251 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 LAGE3Q14657 143 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 NOTCH3Q9UM47 2321 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 TCAPO15273 167 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 UFSP1Q6NVU6 142 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 TMEM158Q8WZ71 300 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 TMEM208Q9BTX3 173 aa10.84□□□□□ -0.67
CCT4-201ENST00000394440 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 TRBV6-5A0A0K0K1A5 114 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 K7EMI3 77 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 M0QY20 66 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
CCT4-201ENST00000394440 CSNK1G2-AS1Q8NCQ2 148 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
CCT4-201ENST00000394440 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 PAM16Q9Y3D7 125 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 F5H697 171 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 RPL35AP18077 110 aaKnown RBP10.83□□□□□ -0.68
CCT4-201ENST00000394440 POLR2KP53803 58 aaKnown RBP10.83□□□□□ -0.68
CCT4-201ENST00000394440 ZNF56Q15929 161 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 WFDC9Q8NEX5 89 aa10.83□□□□□ -0.68
CCT4-201ENST00000394440 A8MWV9 139 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 ATOH7Q8N100 152 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 A0A1B0GV90 55 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 C20orf202A1L168 122 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 DDTP30046 118 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 IFI27L1Q96BM0 104 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 NDUFAF3Q9BU61 184 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
CCT4-201ENST00000394440 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
CCT4-201ENST00000394440 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
CCT4-201ENST00000394440 CSTL1Q9H114 145 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms