RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 A4D1N5 150 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 CDSNQ15517 529 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 AKAP6Q13023 2319 aa12.35□□□□□ -0.43
CNP-201ENST00000393888 AJUBAQ96IF1 538 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 J3QQQ9 107 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 ELANEP08246 267 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 SRD5A1P18405 259 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 AMELXQ99217 191 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 VPS13CQ709C8 3753 aa12.34□□□□□ -0.43
CNP-201ENST00000393888 B5MCH6 92 aa12.33□□□□□ -0.43
CNP-201ENST00000393888 SAA4P35542 130 aa12.33□□□□□ -0.43
CNP-201ENST00000393888 LINC00315P59091 139 aa12.33□□□□□ -0.43
CNP-201ENST00000393888 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.43
CNP-201ENST00000393888 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.43
CNP-201ENST00000393888 SPTA1P02549 2419 aa12.33□□□□□ -0.44
CNP-201ENST00000393888 OOSP1A8MZH6 123 aa12.33□□□□□ -0.44
CNP-201ENST00000393888 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
CNP-201ENST00000393888 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
CNP-201ENST00000393888 ITPR1Q14643 2758 aa12.33□□□□□ -0.44
CNP-201ENST00000393888 CRLF1O75462 422 aa12.32□□□□□ -0.44
CNP-201ENST00000393888 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
CNP-201ENST00000393888 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
CNP-201ENST00000393888 LENEPQ9Y5L5 61 aa12.32□□□□□ -0.44
CNP-201ENST00000393888 PKD1L2Q7Z442 2459 aa12.32□□□□□ -0.44
CNP-201ENST00000393888 IGHV4-39P01824 125 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 SIRPDQ9H106 197 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 SDHAF1A6NFY7 115 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 POLR2KP53803 58 aaKnown RBP12.31□□□□□ -0.44
CNP-201ENST00000393888 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
CNP-201ENST00000393888 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
CNP-201ENST00000393888 IGHV3-11P01762 117 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
CNP-201ENST00000393888 Q1RN00 199 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 IGHV1-69DA0A0B4J2H0 117 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 OVOL1O14753 267 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 CITED1Q99966 193 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 VCX2Q9H322 139 aa12.3□□□□□ -0.44
CNP-201ENST00000393888 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
CNP-201ENST00000393888 C1orf122Q6ZSJ8 110 aa12.29□□□□□ -0.44
CNP-201ENST00000393888 TMEM262E9PQX1 116 aa12.29□□□□□ -0.44
CNP-201ENST00000393888 SOCS3O14543 225 aa12.29□□□□□ -0.44
CNP-201ENST00000393888 PPP1R17O96001 155 aa12.29□□□□□ -0.44
CNP-201ENST00000393888 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
CNP-201ENST00000393888 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 CCL21O00585 134 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 VCYO14598 125 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 GAGE5Q13069 117 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 GAGE6Q13070 117 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 UCNP55089 124 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 Q8N1Y9 231 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
CNP-201ENST00000393888 TRAV41A0A0B4J266 112 aa12.27□□□□□ -0.44
CNP-201ENST00000393888 EDN2P20800 178 aa12.27□□□□□ -0.44
CNP-201ENST00000393888 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
CNP-201ENST00000393888 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
CNP-201ENST00000393888 KLK9Q9UKQ9 250 aa12.27□□□□□ -0.45
CNP-201ENST00000393888 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 A0A087WW49 117 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 SNCGO76070 127 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 UBE2E1P51965 193 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 GAGE2EQ4V326 116 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 TIMM17AQ99595 171 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 GAGE2DQ9UEU5 116 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 POM121L12Q8N7R1 296 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 COL12A1Q99715 3063 aa12.26□□□□□ -0.45
CNP-201ENST00000393888 C11orf71Q6IPW1 123 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 CCDC179H3BU77 68 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 LY6DQ14210 128 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 TMEM223A0PJW6 202 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 RHODO00212 210 aa12.25□□□□□ -0.45
CNP-201ENST00000393888 COL6A6A6NMZ7 2263 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 IGKV3-20P01619 116 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
CNP-201ENST00000393888 ZNF56Q15929 161 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 SPTAN1Q13813 2472 aaKnown RBP12.24□□□□□ -0.45
CNP-201ENST00000393888 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 LEPROTO15243 131 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 LINC01620Q4KN68 170 aa12.24□□□□□ -0.45
CNP-201ENST00000393888 NXPH4O95158 308 aa12.23□□□□□ -0.45
CNP-201ENST00000393888 NPC2P61916 151 aa12.23□□□□□ -0.45
CNP-201ENST00000393888 Q6ZSV7 163 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms