RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.46
PDZD4-202ENST00000393758 TRAV12-1A0A0B4J245 112 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
PDZD4-202ENST00000393758 SNCGO76070 127 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 SUMO4Q6EEV6 95 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 TEX29Q8N6K0 151 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 ADORA2A-AS1P86434 159 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 PPDPFLQ8WWR9 84 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 SIRPDQ9H106 197 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 PRO1854Q9UHT4 67 aa12.2□□□□□ -0.46
PDZD4-202ENST00000393758 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 MT-ATP8P03928 68 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 CD28P10747 220 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
PDZD4-202ENST00000393758 ZFAND2AQ8N6M9 145 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 C5orf56Q8N8D9 126 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 TCF15Q12870 199 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 Q8N6K4 173 aa12.19□□□□□ -0.46
PDZD4-202ENST00000393758 ATP5J2P56134 94 aa12.18□□□□□ -0.46
PDZD4-202ENST00000393758 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
PDZD4-202ENST00000393758 A4D1N5 150 aa12.18□□□□□ -0.46
PDZD4-202ENST00000393758 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
PDZD4-202ENST00000393758 FAM223AQ8IWN6 122 aa12.18□□□□□ -0.46
PDZD4-202ENST00000393758 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
PDZD4-202ENST00000393758 TCL1BO95988 128 aa12.17□□□□□ -0.46
PDZD4-202ENST00000393758 Q6ZS46 218 aa12.17□□□□□ -0.46
PDZD4-202ENST00000393758 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
PDZD4-202ENST00000393758 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
PDZD4-202ENST00000393758 MRPL53Q96EL3 112 aaKnown RBP12.17□□□□□ -0.46
PDZD4-202ENST00000393758 COX8CQ7Z4L0 72 aa12.17□□□□□ -0.46
PDZD4-202ENST00000393758 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 NDUFA4O00483 81 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 SLC25A20O43772 301 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 MORN3Q6PF18 240 aaPredicted RBP12.16□□□□□ -0.46
PDZD4-202ENST00000393758 RELNP78509 3460 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 ZFAND6Q6FIF0 208 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 NDUFA11Q86Y39 141 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 CLUHP3Q96NS8 147 aa12.16□□□□□ -0.46
PDZD4-202ENST00000393758 COX6CP09669 75 aa12.15□□□□□ -0.46
PDZD4-202ENST00000393758 ANKRD29Q8N6D5 301 aa12.15□□□□□ -0.46
PDZD4-202ENST00000393758 NTN5Q8WTR8 489 aaPredicted RBP12.15□□□□□ -0.46
PDZD4-202ENST00000393758 MDFICQ9P1T7 246 aa12.15□□□□□ -0.46
PDZD4-202ENST00000393758 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
PDZD4-202ENST00000393758 IGHV4-38-2P0DP08 117 aa12.15□□□□□ -0.47
PDZD4-202ENST00000393758 EBI3Q14213 229 aa12.15□□□□□ -0.47
PDZD4-202ENST00000393758 ZNF625Q96I27 306 aaPredicted RBP12.15□□□□□ -0.47
PDZD4-202ENST00000393758 AJUBAQ96IF1 538 aa12.15□□□□□ -0.47
PDZD4-202ENST00000393758 PIMREGQ9BSJ6 248 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 LENEPQ9Y5L5 61 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 IGHV1-69DA0A0B4J2H0 117 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 IGHV1-69P01742 117 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 EDN2P20800 178 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 SYNJ2BPP57105 145 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 GAGE2EQ4V326 116 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 TEN1Q86WV5 123 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 GAGE2DQ9UEU5 116 aa12.14□□□□□ -0.47
PDZD4-202ENST00000393758 TRBV20-1A0A075B6N2 111 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 C10orf126Q8N4M7 172 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 CENPEQ02224 2701 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 A0A0J9YY99 117 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 RNASE3P12724 160 aaKnown RBP12.13□□□□□ -0.47
PDZD4-202ENST00000393758 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
PDZD4-202ENST00000393758 SCGB1A1P11684 91 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 IGHV3-38A0A0C4DH36 116 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 CRYBA4P53673 196 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
PDZD4-202ENST00000393758 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
PDZD4-202ENST00000393758 TMEM141Q96I45 108 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
PDZD4-202ENST00000393758 MAPK1IP1LQ8NDC0 245 aa12.11□□□□□ -0.47
PDZD4-202ENST00000393758 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
PDZD4-202ENST00000393758 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
PDZD4-202ENST00000393758 CFC1P0CG37 223 aa12.11□□□□□ -0.47
PDZD4-202ENST00000393758 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
PDZD4-202ENST00000393758 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 C2orf82Q6UX34 121 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 Q6ZUT4 128 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 CCL19Q99731 98 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 ZNF575Q86XF7 245 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 PSMG3-AS1Q96PY0 264 aa12.1□□□□□ -0.47
PDZD4-202ENST00000393758 XGP55808 180 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 LMO4P61968 165 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 Q8N1Y9 231 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 IGHV4-61A0A0C4DH41 118 aa12.09□□□□□ -0.47
PDZD4-202ENST00000393758 P0DMU3 169 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms