RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 UBE2E1P51965 193 aa13.03□□□□□ -0.32
TRAF3IP1-202ENST00000391993 VMO1Q7Z5L0 202 aa13.03□□□□□ -0.32
TRAF3IP1-202ENST00000391993 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
TRAF3IP1-202ENST00000391993 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.32
TRAF3IP1-202ENST00000391993 SYNJ2BPP57105 145 aa13.02□□□□□ -0.32
TRAF3IP1-202ENST00000391993 IGKV3D-7A0A0C4DH55 119 aa13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 INS-IGF2F8WCM5 200 aa13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 DEFB123Q8N688 67 aa13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 NEXN-AS1Q8NBZ9 246 aa13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 E7EQL1 145 aa13.02□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TRAV12-1A0A0B4J245 112 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 B9A039 149 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 ATP5J2P56134 94 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 KALRNO60229 2985 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 MGAQ8IWI9 3026 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 CEMP1Q6PRD7 247 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-202ENST00000391993 MBD3L4A6NDZ8 208 aaPredicted RBP13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 MBD3L3A6NE82 208 aaPredicted RBP13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 MBD3L5A6NJ08 208 aaPredicted RBP13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 Q6ZSV7 163 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 MBD3L2Q8NHZ7 208 aaPredicted RBP13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 CUL9Q8IWT3 2517 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 FAM215AQ9Y5M1 114 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 NRACQ8N912 160 aa13□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TRBV10-2A0A0K0K1G8 114 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 ICOSQ9Y6W8 199 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 NPFFO15130 113 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 M0R1W7 72 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 BUB3O43684 328 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
TRAF3IP1-202ENST00000391993 A0A0G2JNJ9 132 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 A8MZ25 164 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 Q9UFV3 132 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TRIAP1O43715 76 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 C19orf54Q5BKX5 351 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 SMAD5-AS1Q9Y6J3 95 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 ZNF22P17026 224 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 IGLV11-55A0A075B6I3 123 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 IGHV3-16A0A0C4DH30 117 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 PRR30Q53SZ7 412 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 C9orf139Q6ZV77 190 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 SLC25A29Q8N8R3 303 aa12.97□□□□□ -0.33
TRAF3IP1-202ENST00000391993 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 CD59P13987 128 aa12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 TACC2O95359 2948 aa12.96□□□□□ -0.33
TRAF3IP1-202ENST00000391993 C10orf142B7Z368 130 aa12.96□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGLV1-47P01700 117 aa12.96□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGHV3-30P01768 117 aa12.96□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.34
TRAF3IP1-202ENST00000391993 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.34
TRAF3IP1-202ENST00000391993 NCOR2Q9Y618 2525 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 PRB1P04280 392 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 PRIMA1Q86XR5 153 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 OVOL3O00110 214 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 OVOL1O14753 267 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 UBE2D1P51668 147 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 TMEM141Q96I45 108 aa12.95□□□□□ -0.34
TRAF3IP1-202ENST00000391993 TSPEAR-AS2P59090 65 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 NUP37Q8NFH4 326 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 RNF5Q99942 180 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 RHPN1-AS1Q9BWJ2 59 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 PIFOQ8TCI5 191 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 HERVK_113P63121 156 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 ZNF580Q9UK33 172 aa12.94□□□□□ -0.34
TRAF3IP1-202ENST00000391993 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 TRACP01848 142 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 RHOHQ15669 191 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 CCL21O00585 134 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 BAALC-AS2P0C853 105 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 UBE2D3P61077 147 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 UBE2D2P62837 147 aa12.93□□□□□ -0.34
TRAF3IP1-202ENST00000391993 A0A1B0GX51 115 aa12.92□□□□□ -0.34
TRAF3IP1-202ENST00000391993 ABCA2Q9BZC7 2435 aa12.92□□□□□ -0.34
TRAF3IP1-202ENST00000391993 TMEM126AQ9H061 195 aa12.92□□□□□ -0.34
TRAF3IP1-202ENST00000391993 Q9HAA7 133 aa12.92□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGKV2-29A2NJV5 120 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 LGALS9O00182 355 aa12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 PRR9Q5T870 116 aa12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
TRAF3IP1-202ENST00000391993 LEPROTO15243 131 aa12.9□□□□□ -0.34
TRAF3IP1-202ENST00000391993 IGHG4P01861 327 aa12.9□□□□□ -0.34
TRAF3IP1-202ENST00000391993 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms