RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ARHGEF5Q12774 1597 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 LAMC3Q9Y6N6 1575 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 IGKV2-24A0A0C4DH68 120 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 CLPSL1A2RUU4 121 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 GYPBP06028 91 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 IQCJQ1A5X6 159 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 LYPD1Q8N2G4 141 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 TXNDC17Q9BRA2 123 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 REG4Q9BYZ8 158 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 DPH3P1Q9H4G8 78 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 CDK13Q14004 1512 aaKnown RBP0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 KIAA0100Q14667 2235 aaKnown RBP0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 TROQ12816 1431 aaPredicted RBP0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 C10orf71Q711Q0 1435 aa0.97□□□□□ -2.25
SNORA40.19-201ENST00000390846 DOCK11Q5JSL3 2073 aa0.96□□□□□ -2.25
SNORA40.19-201ENST00000390846 KTN1Q86UP2 1357 aaKnown RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 INTS1Q8N201 2190 aaKnown RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 MED12Q93074 2177 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 LRRIQ1Q96JM4 1722 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 APOC4-APOC2K7ER74 178 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 NDUFB6O95139 128 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 APOC2P02655 101 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 LSM3P62310 102 aaKnown RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 KRTAP13-4Q3LI77 160 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 SLC48A1Q6P1K1 146 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 LYPD5Q6UWN5 251 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 SBSPONQ8IVN8 264 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 ZNF431Q8TF32 576 aaPredicted RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 TSLPQ969D9 159 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 SPTSSAQ969W0 71 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 IFI27L1Q96BM0 104 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 ZNF625Q96I27 306 aaPredicted RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 PRO1933Q9H354 126 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 SCN7AQ01118 1682 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 COL5A1P20908 1838 aaPredicted RBP0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 HIVEP2P31629 2446 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 RGPD4Q7Z3J3 1758 aa0.96□□□□□ -2.26
SNORA40.19-201ENST00000390846 MARF1Q9Y4F3 1742 aaKnown RBP0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 CDK12Q9NYV4 1490 aaPredicted RBP0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 TRBV6-5A0A0K0K1A5 114 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 NUPR2A6NF83 97 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 F8W1H4 67 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 NUPR1O60356 82 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 YPEL1O60688 119 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 IGHV3-33P01772 117 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 IL9P15248 144 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 RHOHQ15669 191 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 COL5A1-AS1Q5SY13 56 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 COA5Q86WW8 74 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 SPTSSBQ8NFR3 76 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 FAM213BQ8TBF2 198 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 TMEM141Q96I45 108 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 RGPD3A6NKT7 1758 aaPredicted RBP0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 ADGRB2O60241 1585 aa0.95□□□□□ -2.26
SNORA40.19-201ENST00000390846 ZNF236Q9UL36 1845 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 GOLGA3Q08378 1498 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 SIPA1L3O60292 1781 aaPredicted RBP0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 NBDYA0A0U1RRE5 68 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 PVALEFA0A1B0GWK0 134 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 hADV29S1A0JD25 119 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 TMEM262E9PQX1 116 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 SNCGO76070 127 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 PPYP01298 95 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 COX7CP15954 63 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 PCOTHQ58A44 107 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 C9orf116Q5BN46 136 aaPredicted RBP0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 SPANXN1Q5VSR9 72 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 C2orf82Q6UX34 121 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 BRD3OSQ6XYD6 125 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 C5orf38Q86SI9 138 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 SVBPQ8N300 66 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 CRCT1Q9UGL9 99 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 C22orf24Q9Y442 160 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 SCAPERQ9BY12 1400 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 TRIOBPQ9H2D6 2365 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 ANKRD36BQ8N2N9 1353 aa0.94□□□□□ -2.26
SNORA40.19-201ENST00000390846 MED13LQ71F56 2210 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 SDK1Q7Z5N4 2213 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 TOP2BQ02880 1626 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 PLEKHH2Q8IVE3 1493 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 IFT140Q96RY7 1462 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 TRAV12-3A0A0B4J271 114 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 TEX49A0A1B0GTD5 131 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 LOC101927531A0A1B0GV80 90 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 TCRBV3S1A0A5B6 114 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 TMEM30CPA0ZSE6 113 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 C10orf142B7Z368 130 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 HCRTO43612 131 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 MRPS14O60783 128 aaKnown RBP0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 CCKP06307 115 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 SNCAP37840 140 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 POLR2JP52435 117 aaKnown RBP0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 KRTAP12-1P59990 96 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 PYY3Q5JQD4 70 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 OR10AG1Q8NH19 301 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 ORMDL1Q9P0S3 153 aa0.93□□□□□ -2.26
SNORA40.19-201ENST00000390846 COL4A1P02462 1669 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms