RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
SCFD2-201ENST00000388940 LRRC75A-AS1Q8N1F1 130 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 JPT2Q9H910 190 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 TRAV26-1A0A087WT03 109 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 VCYO14598 125 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 SYT8Q8NBV8 401 aa11.11□□□□□ -0.63
SCFD2-201ENST00000388940 ANKRD17O75179 2603 aaKnown RBP11.1□□□□□ -0.63
SCFD2-201ENST00000388940 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
SCFD2-201ENST00000388940 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 Q8N2B8 174 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
SCFD2-201ENST00000388940 GTSF1LQ9H1H1 148 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
SCFD2-201ENST00000388940 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
SCFD2-201ENST00000388940 H3BUT2 72 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
SCFD2-201ENST00000388940 CEND1Q8N111 149 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 LINC01619G3V211 115 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 GCSHP23434 173 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 FXYD2P54710 66 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 ZFP2Q6ZN57 461 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 JMJD8Q96S16 334 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
SCFD2-201ENST00000388940 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 A0A087WWL8 130 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 AMTNQ6UX39 209 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 Q8N1Y9 231 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
SCFD2-201ENST00000388940 IGIPA6NJ69 53 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 F5H697 171 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 A0A1W2PPM0 123 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 E9PLD3 99 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 J3QR89 54 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 CRYGDP07320 174 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 RAB37Q96AX2 223 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 DUX5Q96PT3 197 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
SCFD2-201ENST00000388940 MYO18BQ8IUG5 2567 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 AGRNO00468 2067 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 TRAV2A0A0B4J234 112 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 A8MTW9 85 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 TP53TG1Q9Y2A0 90 aa11.06□□□□□ -0.64
SCFD2-201ENST00000388940 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
SCFD2-201ENST00000388940 M0QY20 66 aa11.05□□□□□ -0.64
SCFD2-201ENST00000388940 TSHBP01222 138 aa11.05□□□□□ -0.64
SCFD2-201ENST00000388940 PHLDA1Q8WV24 401 aaPredicted RBP11.05□□□□□ -0.64
SCFD2-201ENST00000388940 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
SCFD2-201ENST00000388940 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
SCFD2-201ENST00000388940 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
SCFD2-201ENST00000388940 CRYBG3Q68DQ2 2970 aa11.05□□□□□ -0.64
SCFD2-201ENST00000388940 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
SCFD2-201ENST00000388940 PMVKQ15126 192 aa11.04□□□□□ -0.64
SCFD2-201ENST00000388940 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
SCFD2-201ENST00000388940 TRPT1Q86TN4 253 aaKnown RBP11.04□□□□□ -0.64
SCFD2-201ENST00000388940 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
SCFD2-201ENST00000388940 ZFYVE26Q68DK2 2539 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 DOPEY2Q9Y3R5 2298 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 TRBV7-3A0A075B6L6 115 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 SLURP1P55000 103 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 RHOHQ15669 191 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 ZNF56Q15929 161 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 SPCS1Q9Y6A9 102 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 FBN2P35556 2912 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 TEX48A0A1B0GUV7 120 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 FABP2P12104 132 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
SCFD2-201ENST00000388940 PEMTQ9UBM1 199 aa11.03□□□□□ -0.64
SCFD2-201ENST00000388940 NSUN5P1Q3KNT7 163 aa11.02□□□□□ -0.65
SCFD2-201ENST00000388940 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.65
SCFD2-201ENST00000388940 ZNF479Q96JC4 524 aa11.02□□□□□ -0.65
SCFD2-201ENST00000388940 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.65
SCFD2-201ENST00000388940 EDA2RQ9HAV5 297 aa11.02□□□□□ -0.65
SCFD2-201ENST00000388940 TSPAN13O95857 204 aa11.01□□□□□ -0.65
SCFD2-201ENST00000388940 RPL24P83731 157 aaKnown RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1049.5 ms