RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SERTM2A0A1B0GWG4 89 aa10.89□□□□□ -0.67
HMGN1-203ENST00000380748 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
HMGN1-203ENST00000380748 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
HMGN1-203ENST00000380748 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
HMGN1-203ENST00000380748 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
HMGN1-203ENST00000380748 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
HMGN1-203ENST00000380748 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
HMGN1-203ENST00000380748 TRBV7-3A0A075B6L6 115 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 TRBV10-1A0A0K0K1A3 114 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
HMGN1-203ENST00000380748 TCRBP04435 133 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 IL7P13232 177 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 NUDT15Q9NV35 164 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 PRR34Q9NV39 138 aa10.88□□□□□ -0.67
HMGN1-203ENST00000380748 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
HMGN1-203ENST00000380748 PLA2G10O15496 165 aa10.87□□□□□ -0.67
HMGN1-203ENST00000380748 SLPIP03973 132 aa10.87□□□□□ -0.67
HMGN1-203ENST00000380748 FLI1Q01543 452 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-203ENST00000380748 C5orf17Q8NAS9 161 aa10.87□□□□□ -0.67
HMGN1-203ENST00000380748 CHCHD5Q9BSY4 110 aa10.87□□□□□ -0.67
HMGN1-203ENST00000380748 H0YIZ8 118 aa10.86□□□□□ -0.67
HMGN1-203ENST00000380748 PTTG1O95997 202 aa10.86□□□□□ -0.67
HMGN1-203ENST00000380748 LRRC37A5PQ49AS3 106 aa10.86□□□□□ -0.67
HMGN1-203ENST00000380748 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
HMGN1-203ENST00000380748 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
HMGN1-203ENST00000380748 K7EQM0 130 aa10.85□□□□□ -0.67
HMGN1-203ENST00000380748 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
HMGN1-203ENST00000380748 LINC00269Q8N2A0 174 aa10.85□□□□□ -0.67
HMGN1-203ENST00000380748 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
HMGN1-203ENST00000380748 KRTAP9-6A0A140TA67 174 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 B4DEV8 164 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 LYRM1O43325 122 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 SIX6O95475 246 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 RAB2AP61019 212 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 OR10G8Q8NGN5 311 aa10.84□□□□□ -0.67
HMGN1-203ENST00000380748 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
HMGN1-203ENST00000380748 RBX1P62877 108 aa10.83□□□□□ -0.68
HMGN1-203ENST00000380748 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
HMGN1-203ENST00000380748 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-203ENST00000380748 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 GRIFINA4D1Z8 144 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 FABP5P3A8MUU1 101 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 M0R381 172 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 PKIAP61925 76 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 SCGB1C1Q8TD33 95 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 SMIM3Q9BZL3 60 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 AP5S1Q9NUS5 200 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
HMGN1-203ENST00000380748 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 M0R036 132 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 H2AFB2P0C5Z0 115 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 DNLZQ5SXM8 178 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
HMGN1-203ENST00000380748 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 KRBOX1C9JBD0 128 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 SUMO1P63165 101 aaKnown RBP10.8□□□□□ -0.68
HMGN1-203ENST00000380748 GAGE6Q13070 117 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 HSPB11Q9Y547 144 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 ARL2-SNX15V9GYD0 113 aa10.8□□□□□ -0.68
HMGN1-203ENST00000380748 COX6A2Q02221 97 aa10.79□□□□□ -0.68
HMGN1-203ENST00000380748 MAJINQ3KP22 176 aa10.79□□□□□ -0.68
HMGN1-203ENST00000380748 RBM38Q9H0Z9 239 aaKnown RBP10.79□□□□□ -0.68
HMGN1-203ENST00000380748 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
HMGN1-203ENST00000380748 TPT1P13693 172 aaKnown RBP10.78□□□□□ -0.68
HMGN1-203ENST00000380748 REG3AQ06141 175 aa10.78□□□□□ -0.68
HMGN1-203ENST00000380748 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
HMGN1-203ENST00000380748 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 GCHFRP30047 84 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 CRIP1P50238 77 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 PRR27Q6MZM9 219 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 STPG4Q8N801 248 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
HMGN1-203ENST00000380748 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 CDC34P49427 236 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-203ENST00000380748 RAB5CP51148 216 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 RAB4BP61018 213 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGN1-203ENST00000380748 ZNF56Q15929 161 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 PRSS3P2Q8NHM4 247 aa10.76□□□□□ -0.69
HMGN1-203ENST00000380748 SH2D1AO60880 128 aa10.75□□□□□ -0.69
HMGN1-203ENST00000380748 Q86TA4 180 aa10.75□□□□□ -0.69
HMGN1-203ENST00000380748 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-203ENST00000380748 C20orf203Q8NBC4 194 aa10.74□□□□□ -0.69
HMGN1-203ENST00000380748 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
HMGN1-203ENST00000380748 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
HMGN1-203ENST00000380748 RPL12P30050 165 aaKnown RBP10.73□□□□□ -0.69
HMGN1-203ENST00000380748 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
HMGN1-203ENST00000380748 PPP1R1CQ8WVI7 109 aa10.73□□□□□ -0.69
HMGN1-203ENST00000380748 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
HMGN1-203ENST00000380748 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms