RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TMEM200BQ69YZ2 307 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 DYNAPQ8N1N2 210 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 LINC00482Q8N8I6 264 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 RETNQ9HD89 108 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 ARHGAP32A7KAX9 2087 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 CGB3P0DN86 165 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 CGB7P0DN87 165 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 SLC50A1Q9BRV3 221 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 ZNF576Q9H609 170 aa6.43□□□□□ -1.38
NHLRC3-201ENST00000379599 IGKV3D-20A0A0C4DH25 116 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 LEPROTO15243 131 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 LYZL6O75951 148 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 GPR179Q6PRD1 2367 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 A0A0U1RRA0 63 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 DNAL4O96015 105 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 NDPQ00604 133 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 TSHBP01222 138 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
NHLRC3-201ENST00000379599 SPTBN2O15020 2390 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 SLC25A45Q8N413 288 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 ZNF491Q8N8L2 437 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 C11orf21Q9P2W6 132 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 PINLYPA6NC86 204 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 SRRM5B3KS81 715 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 NBR2O15453 112 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1A1P0DJD3 496 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1CP0DJD4 496 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 WT1P19544 449 aaPredicted RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 PDE6HQ13956 83 aa6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 RBMY1FQ15415 496 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 PRRC2AP48634 2157 aaKnown RBP6.41□□□□□ -1.38
NHLRC3-201ENST00000379599 LMO7DNF2Z398 122 aa6.4□□□□□ -1.38
NHLRC3-201ENST00000379599 NXPH4O95158 308 aa6.4□□□□□ -1.38
NHLRC3-201ENST00000379599 GHRHP01286 108 aa6.4□□□□□ -1.38
NHLRC3-201ENST00000379599 INAFM2P0DMQ5 153 aa6.4□□□□□ -1.38
NHLRC3-201ENST00000379599 CCL13Q99616 98 aa6.4□□□□□ -1.38
NHLRC3-201ENST00000379599 FREM2Q5SZK8 3169 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 PSMB8P28062 276 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 GFRALQ6UXV0 394 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 ZNF833PQ6ZTB9 187 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 COX8CQ7Z4L0 72 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 DAND5Q8N907 189 aa6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 OPRPNQ99935 248 aaPredicted RBP6.4□□□□□ -1.39
NHLRC3-201ENST00000379599 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 LINC00474Q9P2X8 69 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 PRRC2CQ9Y520 2896 aaKnown RBP6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 MGAQ8IWI9 3026 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 TRAV23DV6A0A075B6W5 121 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 IGLV2-23P01705 113 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHG2P01859 326 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 IMMP1LQ96LU5 166 aa6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 EP300Q09472 2414 aaPredicted RBP6.39□□□□□ -1.39
NHLRC3-201ENST00000379599 RBM3P98179 157 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 SS18Q15532 418 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV7-4-1A0A0J9YVY3 117 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 IGIPA6NJ69 53 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 IGLV3-19P01714 112 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 WNK2Q9Y3S1 2297 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 SPRY3O43610 288 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 CCL3L1P16619 93 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 SPINK14Q6IE38 97 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 TMEM141Q96I45 108 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 CEP250Q9BV73 2442 aa6.38□□□□□ -1.39
NHLRC3-201ENST00000379599 POLEQ07864 2286 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV3OR16-10A0A075B7F0 116 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 XCL1P47992 114 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 HILS1P60008 231 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 PVRIGQ6DKI7 326 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 XCL2Q9UBD3 114 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV1-69DA0A0B4J2H0 117 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 A0A0J9YXV3 536 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 I3L2K1 104 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 RNF7Q9UBF6 113 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 MED13Q9UHV7 2174 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV3-35A0A0C4DH35 117 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 Q6JHZ5 121 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 MPLKIPQ8TAP9 179 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 Q9HAA7 133 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1592.5 ms