RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 PET117Q6UWS5 81 aa12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 PRIMA1Q86XR5 153 aa12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 STHQ8IWL8 128 aa12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 LOC102724200A0A096LPH7 203 aaPredicted RBP12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
LYSMD4-203ENST00000378904 INSL3P51460 131 aa12.9□□□□□ -0.34
LYSMD4-203ENST00000378904 COTL1Q14019 142 aa12.9□□□□□ -0.34
LYSMD4-203ENST00000378904 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
LYSMD4-203ENST00000378904 RBMY1A1P0DJD3 496 aaKnown RBP12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 RBMY1CP0DJD4 496 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 CACNG7P62955 275 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 RBMY1FQ15415 496 aaKnown RBP12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 C9orf66Q5T8R8 295 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 SPANXN1Q5VSR9 72 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 C12orf54Q6X4T0 127 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 C19orf73Q9NVV2 129 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
LYSMD4-203ENST00000378904 SPRY2O43597 315 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 WFDC10AQ9H1F0 79 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
LYSMD4-203ENST00000378904 LINC01545Q5VT33 79 aa12.87□□□□□ -0.35
LYSMD4-203ENST00000378904 ZNF747Q9BV97 191 aa12.87□□□□□ -0.35
LYSMD4-203ENST00000378904 CST9LQ9H4G1 147 aa12.87□□□□□ -0.35
LYSMD4-203ENST00000378904 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
LYSMD4-203ENST00000378904 ERASQ7Z444 233 aa12.86□□□□□ -0.35
LYSMD4-203ENST00000378904 Q8N1Y9 231 aa12.86□□□□□ -0.35
LYSMD4-203ENST00000378904 MUC4Q99102 2169 aa12.86□□□□□ -0.35
LYSMD4-203ENST00000378904 M0R381 172 aa12.86□□□□□ -0.35
LYSMD4-203ENST00000378904 IGHV3-16A0A0C4DH30 117 aa12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 HSPB8Q9UJY1 196 aa12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 EVI2AP22794 236 aa12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
LYSMD4-203ENST00000378904 INSP01308 110 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 C2orf91Q6ZV80 131 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 MCRIP2Q9BUT9 160 aaKnown RBP12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 XCL2Q9UBD3 114 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 VWFP04275 2813 aa12.84□□□□□ -0.35
LYSMD4-203ENST00000378904 COX8AP10176 69 aa12.83□□□□□ -0.35
LYSMD4-203ENST00000378904 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.35
LYSMD4-203ENST00000378904 C3orf56Q8N813 242 aa12.83□□□□□ -0.35
LYSMD4-203ENST00000378904 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
LYSMD4-203ENST00000378904 CBY3A6NI87 242 aa12.83□□□□□ -0.36
LYSMD4-203ENST00000378904 D6R8Y8 96 aa12.83□□□□□ -0.36
LYSMD4-203ENST00000378904 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
LYSMD4-203ENST00000378904 HTN1P15515 57 aa12.82□□□□□ -0.36
LYSMD4-203ENST00000378904 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
LYSMD4-203ENST00000378904 NXPH4O95158 308 aa12.82□□□□□ -0.36
LYSMD4-203ENST00000378904 U3KQK5 164 aa12.82□□□□□ -0.36
LYSMD4-203ENST00000378904 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
LYSMD4-203ENST00000378904 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
LYSMD4-203ENST00000378904 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
LYSMD4-203ENST00000378904 LINC01587Q99440 93 aa12.81□□□□□ -0.36
LYSMD4-203ENST00000378904 FBN1P35555 2871 aaKnown RBP12.81□□□□□ -0.36
LYSMD4-203ENST00000378904 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 CKS2P33552 79 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 MAST4O15021 2626 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 PRM2P04554 102 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 SHISA2Q6UWI4 295 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
LYSMD4-203ENST00000378904 NCR2O95944 276 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 FGF6P10767 208 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 SEC11AP67812 179 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 C1orf158Q8N1D5 194 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 C14orf178Q8N769 122 aaPredicted RBP12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 AP1S3Q96PC3 154 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
LYSMD4-203ENST00000378904 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
LYSMD4-203ENST00000378904 GIG44P09565 113 aaPredicted RBP12.78□□□□□ -0.36
LYSMD4-203ENST00000378904 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
LYSMD4-203ENST00000378904 VPS25Q9BRG1 176 aa12.77□□□□□ -0.36
LYSMD4-203ENST00000378904 GAS8-AS1O95177 125 aa12.77□□□□□ -0.37
LYSMD4-203ENST00000378904 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 A0A096LNJ9 63 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 H0Y8G0 127 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 WIPF1O43516 503 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 NPYP01303 97 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 UFSP1Q6NVU6 142 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 SYT8Q8NBV8 401 aa12.76□□□□□ -0.37
LYSMD4-203ENST00000378904 TRRAPQ9Y4A5 3859 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms