RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TRBV7-9A0A0J9YWB2 115 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 H3BUT2 72 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 RNASE4P34096 147 aaKnown RBP14.49□□□□□ -0.09
SSU72-204ENST00000378726 LINC01546A6NGU7 62 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 K7EP34 96 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 CCL24O00175 119 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 TNFRSF6BO95407 300 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 RIPPLY3P57055 190 aa14.49□□□□□ -0.09
SSU72-204ENST00000378726 TRAV21A0A0B4J279 112 aa14.48□□□□□ -0.09
SSU72-204ENST00000378726 NDUFA7O95182 113 aa14.48□□□□□ -0.09
SSU72-204ENST00000378726 APRG1Q8IVJ8 170 aa14.47□□□□□ -0.09
SSU72-204ENST00000378726 RAB37Q96AX2 223 aa14.47□□□□□ -0.09
SSU72-204ENST00000378726 FCER1GP30273 86 aa14.47□□□□□ -0.09
SSU72-204ENST00000378726 FHL3Q13643 280 aa14.47□□□□□ -0.09
SSU72-204ENST00000378726 IGKV2D-26A0A0A0MRZ7 120 aa14.46□□□□□ -0.09
SSU72-204ENST00000378726 A0A0J9YX75 114 aa14.46□□□□□ -0.09
SSU72-204ENST00000378726 SORL1Q92673 2214 aa14.46□□□□□ -0.09
SSU72-204ENST00000378726 ODF1Q14990 250 aa14.46□□□□□ -0.1
SSU72-204ENST00000378726 OR2K2Q8NGT1 345 aa14.46□□□□□ -0.1
SSU72-204ENST00000378726 DYNLRB2Q8TF09 96 aa14.46□□□□□ -0.1
SSU72-204ENST00000378726 TMEM61Q8N0U2 210 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 TTTY13Q9BZ97 58 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 ZMAT4Q9H898 229 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 HHLA3Q9XRX5 114 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 PROK1P58294 105 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 DEFB114Q30KQ6 69 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 NEGR1Q7Z3B1 354 aa14.45□□□□□ -0.1
SSU72-204ENST00000378726 NXT2Q9NPJ8 142 aaKnown RBP14.45□□□□□ -0.1
SSU72-204ENST00000378726 IGKV3-20P01619 116 aa14.44□□□□□ -0.1
SSU72-204ENST00000378726 KLLNB2CW77 178 aa14.43□□□□□ -0.1
SSU72-204ENST00000378726 PRSS1P07477 247 aa14.43□□□□□ -0.1
SSU72-204ENST00000378726 OR5A1Q8NGJ0 315 aa14.43□□□□□ -0.1
SSU72-204ENST00000378726 TMEM158Q8WZ71 300 aa14.43□□□□□ -0.1
SSU72-204ENST00000378726 HIVEP1P15822 2718 aa14.43□□□□□ -0.1
SSU72-204ENST00000378726 CHTOPQ9Y3Y2 248 aaKnown RBP14.43□□□□□ -0.1
SSU72-204ENST00000378726 ANXA2RQ3ZCQ2 193 aa14.42□□□□□ -0.1
SSU72-204ENST00000378726 IGLV2-18A0A075B6J9 118 aa14.42□□□□□ -0.1
SSU72-204ENST00000378726 CIDEAO60543 219 aa14.42□□□□□ -0.1
SSU72-204ENST00000378726 DUSP14O95147 198 aaKnown RBP14.42□□□□□ -0.1
SSU72-204ENST00000378726 CD300EQ496F6 205 aaPredicted RBP14.42□□□□□ -0.1
SSU72-204ENST00000378726 FOXI2Q6ZQN5 318 aa14.42□□□□□ -0.1
SSU72-204ENST00000378726 SETXQ7Z333 2677 aaKnown RBP14.41□□□□□ -0.1
SSU72-204ENST00000378726 TRAV2A0A0B4J234 112 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 DEFB131AP59861 70 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 ODF3Q96PU9 254 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 A0A1W2PPM0 123 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 IGKCP01834 107 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 GTSCR1Q86UQ5 136 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 Q8N8P6 123 aa14.41□□□□□ -0.1
SSU72-204ENST00000378726 TRAV26-2A0A0B4J265 109 aa14.4□□□□□ -0.1
SSU72-204ENST00000378726 SMIM17P0DL12 118 aa14.4□□□□□ -0.1
SSU72-204ENST00000378726 WNK1Q9H4A3 2382 aa14.4□□□□□ -0.1
SSU72-204ENST00000378726 H3BVH4 76 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 GCSHP23434 173 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 SPCS1Q9Y6A9 102 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 TRAV12-3A0A0B4J271 114 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 GNRH2O43555 120 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 S100A4P26447 101 aaKnown RBP14.39□□□□□ -0.11
SSU72-204ENST00000378726 FXYD2P54710 66 aa14.39□□□□□ -0.11
SSU72-204ENST00000378726 FLNBO75369 2602 aaKnown RBP14.39□□□□□ -0.11
SSU72-204ENST00000378726 NSD1Q96L73 2696 aaPredicted RBP14.39□□□□□ -0.11
SSU72-204ENST00000378726 NSUN5P1Q3KNT7 163 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 SPANXN1Q5VSR9 72 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 KNCNA6PVL3 124 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 ASIPP42127 132 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 NRACQ8N912 160 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 AGRNO00468 2067 aa14.38□□□□□ -0.11
SSU72-204ENST00000378726 FN1P02751 2386 aaKnown RBP14.37□□□□□ -0.11
SSU72-204ENST00000378726 TRAV12-2A0A075B6T6 113 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 ADARB2-AS1A8MUL3 147 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 SMIM13P0DJ93 91 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 FABP2P12104 132 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 ZC2HC1BQ5TFG8 222 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 FAM159AQ6UWV7 190 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 CHAC1Q9BUX1 264 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 HIGD1BQ9P298 99 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 IGHV4-4A0A075B6R2 117 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 ATP5LO75964 103 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 DPM2O94777 84 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 SPINK13Q1W4C9 94 aa14.37□□□□□ -0.11
SSU72-204ENST00000378726 SPAG8Q99932 426 aaPredicted RBP14.37□□□□□ -0.11
SSU72-204ENST00000378726 CRLF1O75462 422 aa14.36□□□□□ -0.11
SSU72-204ENST00000378726 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
SSU72-204ENST00000378726 TRBV25-1A0A075B6N4 114 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 TRAV25A0A0B4J276 109 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 K7ERJ3 54 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 SPRY2O43597 315 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 SAMD5Q5TGI4 173 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 AMTNQ6UX39 209 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 MAP6D1Q9H9H5 199 aa14.35□□□□□ -0.11
SSU72-204ENST00000378726 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
SSU72-204ENST00000378726 H3BMM0 161 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 HLA-DRB4P13762 266 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 LAGE3Q14657 143 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 HLA-DRB4X5D2U9 266 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 MAPKAPK5-AS1Q8N8E1 139 aa14.34□□□□□ -0.11
SSU72-204ENST00000378726 PRSS47A8MTI9 375 aa14.33□□□□□ -0.12
SSU72-204ENST00000378726 RNASE3P12724 160 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms