RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
TUBGCP3-202ENST00000375669 Q8N9W7 124 aa13.6□□□□□ -0.23
TUBGCP3-202ENST00000375669 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 P0DMU3 169 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 FAM231AP0DMU4 169 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 FAM231CP0DMU5 169 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 TEX49A0A1B0GTD5 131 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 A4D1N5 150 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 RNF223E7ERA6 249 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 F6UB75 175 aa13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 RPL13AP40429 203 aaKnown RBP13.59□□□□□ -0.23
TUBGCP3-202ENST00000375669 LINC01620Q4KN68 170 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 MDFICQ9P1T7 246 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 H7C2G1 150 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 EIF4EBP3O60516 100 aaPredicted RBP13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 ARL3P36405 182 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 C16orf92Q96LL3 132 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 C20orf173Q96LM9 149 aa13.58□□□□□ -0.24
TUBGCP3-202ENST00000375669 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 ATXN8Q156A1 80 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 TMEM219Q86XT9 240 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 IGHV3OR16-10A0A075B7F0 116 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 TSHBP01222 138 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 LINC01600Q96MT4 127 aa13.57□□□□□ -0.24
TUBGCP3-202ENST00000375669 GNRH2O43555 120 aa13.56□□□□□ -0.24
TUBGCP3-202ENST00000375669 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
TUBGCP3-202ENST00000375669 AMELXQ99217 191 aa13.56□□□□□ -0.24
TUBGCP3-202ENST00000375669 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
TUBGCP3-202ENST00000375669 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
TUBGCP3-202ENST00000375669 TRAV2A0A0B4J234 112 aa13.55□□□□□ -0.24
TUBGCP3-202ENST00000375669 ELANEP08246 267 aa13.55□□□□□ -0.24
TUBGCP3-202ENST00000375669 PMVKQ15126 192 aa13.55□□□□□ -0.24
TUBGCP3-202ENST00000375669 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
TUBGCP3-202ENST00000375669 Q8N6K4 173 aa13.55□□□□□ -0.24
TUBGCP3-202ENST00000375669 SORL1Q92673 2214 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 H3BMM0 161 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 J3QQQ9 107 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 LGALS9O00182 355 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 CCL21O00585 134 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 IGHV4-39P01824 125 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 TCF15Q12870 199 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 UBE2WQ96B02 151 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 JPT2Q9H910 190 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 CELSR2Q9HCU4 2923 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 TRBV10-2A0A0K0K1G8 114 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 C1orf122Q6ZSJ8 110 aa13.54□□□□□ -0.24
TUBGCP3-202ENST00000375669 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 IGHV1-69DA0A0B4J2H0 117 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 LGALS3P17931 250 aaKnown RBP13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 TP53TG1Q9Y2A0 90 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 Q1RN00 199 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 UNQ9165/PRO28630Q6UXU0 137 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 C9orf47Q6ZRZ4 202 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 METTL26Q96S19 204 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 VPREB3Q9UKI3 123 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
TUBGCP3-202ENST00000375669 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.24
TUBGCP3-202ENST00000375669 FOXC1Q12948 553 aa13.52□□□□□ -0.24
TUBGCP3-202ENST00000375669 MRPL23Q16540 153 aaKnown RBP13.52□□□□□ -0.24
TUBGCP3-202ENST00000375669 TMEM126AQ9H061 195 aa13.52□□□□□ -0.24
TUBGCP3-202ENST00000375669 RPL39P62891 51 aaKnown RBP13.52□□□□□ -0.25
TUBGCP3-202ENST00000375669 ZNRF2Q8NHG8 242 aa13.51□□□□□ -0.25
TUBGCP3-202ENST00000375669 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
TUBGCP3-202ENST00000375669 MUSTN1Q8IVN3 82 aa13.51□□□□□ -0.25
TUBGCP3-202ENST00000375669 CHCHD5Q9BSY4 110 aa13.51□□□□□ -0.25
TUBGCP3-202ENST00000375669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.257e-7■■■■□ 25.3
TUBGCP3-202ENST00000375669 M0R1W7 72 aa13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 PPP1R17O96001 155 aa13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 SAA4P35542 130 aa13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 MRPL53Q96EL3 112 aaKnown RBP13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 BEX4Q9NWD9 120 aaPredicted RBP13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 CREBBPQ92793 2442 aa13.5□□□□□ -0.25
TUBGCP3-202ENST00000375669 IGF2-ASQ6U949 168 aa13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 FAM110DQ8TAY7 271 aaPredicted RBP13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 YAE1D1Q9NRH1 226 aa13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 IGHV3-11P01762 117 aa13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 TMEM141Q96I45 108 aa13.49□□□□□ -0.25
TUBGCP3-202ENST00000375669 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 A0A087WWL8 130 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 LINC01587Q99440 93 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 MUC4Q99102 2169 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 ZNF56Q15929 161 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 TRBV30A0A0K0K1B3 111 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 ZFAND2AQ8N6M9 145 aa13.48□□□□□ -0.25
TUBGCP3-202ENST00000375669 ZNF876PQ49A33 203 aa13.47□□□□□ -0.25
TUBGCP3-202ENST00000375669 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
TUBGCP3-202ENST00000375669 TRIAP1O43715 76 aa13.47□□□□□ -0.25
TUBGCP3-202ENST00000375669 EDN2P20800 178 aa13.46□□□□□ -0.25
TUBGCP3-202ENST00000375669 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.25
TUBGCP3-202ENST00000375669 TIMM17AQ99595 171 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms