RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
MCF2L-203ENST00000375604 IL15RAQ13261 267 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 KLK12Q9UKR0 248 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 CCL25O15444 150 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 TRACP01848 142 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 GTF3C1Q12789 2109 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 PRORYQ9H606 182 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 Q8NFD4 153 aa13.16□□□□□ -0.3
MCF2L-203ENST00000375604 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
MCF2L-203ENST00000375604 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-203ENST00000375604 ABCA4P78363 2273 aa13.15□□□□□ -0.3
MCF2L-203ENST00000375604 VSIG2Q96IQ7 327 aa13.15□□□□□ -0.3
MCF2L-203ENST00000375604 TRBV20-1A0A075B6N2 111 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 CRYBA4P53673 196 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 DAZAP2Q15038 168 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-203ENST00000375604 OBSL1O75147 1896 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 TDRG1Q3Y452 100 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 RNF138Q8WVD3 245 aa13.14□□□□□ -0.31
MCF2L-203ENST00000375604 K7EP13 123 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.318e-7■■■□□ 15.1
MCF2L-203ENST00000375604 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
MCF2L-203ENST00000375604 DAZ4Q86SG3 579 aaKnown RBP13.13□□□□□ -0.31
MCF2L-203ENST00000375604 DAZ3Q9NR90 486 aaKnown RBP13.13□□□□□ -0.31
MCF2L-203ENST00000375604 SMAD5-AS1Q9Y6J3 95 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 CLPSL1A2RUU4 121 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
MCF2L-203ENST00000375604 C10orf99Q6UWK7 81 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 UBE2AP49459 152 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 FAM167A-AS1Q96KT0 104 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 CFC1P0CG37 223 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 SND1-IT1Q9HBX3 110 aa13.12□□□□□ -0.31
MCF2L-203ENST00000375604 BAALCQ8WXS3 180 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 F8W1H4 67 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
MCF2L-203ENST00000375604 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-203ENST00000375604 A6NDX4 124 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 IGHV4-31P0DP07 118 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
MCF2L-203ENST00000375604 IGLV1-47P01700 117 aa13.1□□□□□ -0.31
MCF2L-203ENST00000375604 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-203ENST00000375604 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
MCF2L-203ENST00000375604 LINC00482Q8N8I6 264 aa13.1□□□□□ -0.31
MCF2L-203ENST00000375604 TMEM131Q92545 1883 aa13.1□□□□□ -0.31
MCF2L-203ENST00000375604 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
MCF2L-203ENST00000375604 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 PCNX1Q96RV3 2341 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 MED13Q9UHV7 2174 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 IGHG2P01859 326 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 MYCNOSP40205 109 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
MCF2L-203ENST00000375604 LRCOL1A6NCL2 159 aa13.08□□□□□ -0.32
MCF2L-203ENST00000375604 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
MCF2L-203ENST00000375604 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
MCF2L-203ENST00000375604 IFITM1P13164 125 aa13.08□□□□□ -0.32
MCF2L-203ENST00000375604 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
MCF2L-203ENST00000375604 TRAV26-1A0A087WT03 109 aa13.07□□□□□ -0.32
MCF2L-203ENST00000375604 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
MCF2L-203ENST00000375604 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
MCF2L-203ENST00000375604 ANKRD29Q8N6D5 301 aa13.07□□□□□ -0.32
MCF2L-203ENST00000375604 IGF1P05019 195 aa13.06□□□□□ -0.32
MCF2L-203ENST00000375604 A4D1N5 150 aa13.06□□□□□ -0.32
MCF2L-203ENST00000375604 GPHB5Q86YW7 130 aa13.06□□□□□ -0.32
MCF2L-203ENST00000375604 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
MCF2L-203ENST00000375604 ZNF843Q8N446 348 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
MCF2L-203ENST00000375604 HERV-K104P63124 156 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 NUP210LQ5VU65 1888 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 GAGE12HA6NDE8 117 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-203ENST00000375604 MRPL52Q86TS9 123 aaKnown RBP13.05□□□□□ -0.32
MCF2L-203ENST00000375604 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
MCF2L-203ENST00000375604 Q6ZTI0 123 aa13.04□□□□□ -0.32
MCF2L-203ENST00000375604 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
MCF2L-203ENST00000375604 LMO4P61968 165 aa13.03□□□□□ -0.32
MCF2L-203ENST00000375604 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
MCF2L-203ENST00000375604 TM2D2Q9BX73 214 aa13.03□□□□□ -0.32
MCF2L-203ENST00000375604 MALRD1Q5VYJ5 2156 aa13.03□□□□□ -0.32
MCF2L-203ENST00000375604 NDUFA1O15239 70 aa13.03□□□□□ -0.32
MCF2L-203ENST00000375604 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.32
MCF2L-203ENST00000375604 RNF152Q8N8N0 203 aa13.02□□□□□ -0.32
MCF2L-203ENST00000375604 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.32
MCF2L-203ENST00000375604 SPAG11BQ08648 103 aa13.02□□□□□ -0.32
MCF2L-203ENST00000375604 CHD3Q12873 2000 aaKnown RBP13.02□□□□□ -0.33
MCF2L-203ENST00000375604 Q6ZSR3 168 aa13.02□□□□□ -0.33
MCF2L-203ENST00000375604 Q6ZUT4 128 aa13.02□□□□□ -0.33
MCF2L-203ENST00000375604 LINC00269Q8N2A0 174 aa13.02□□□□□ -0.33
MCF2L-203ENST00000375604 LTBP2Q14767 1821 aa13.02□□□□□ -0.33
MCF2L-203ENST00000375604 A0A096LNI7 61 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms