RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 RNF5Q99942 180 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 H7C1H1 209 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 UCNP55089 124 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 DTX2Q86UW9 622 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 LYPD1Q8N2G4 141 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 ZNF815PA8K554 130 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 LAGE3Q14657 143 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 ODF3Q96PU9 254 aa13.18□□□□□ -0.3
LDLRAP1-201ENST00000374338 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 C9JAW5 83 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 PRADC1Q9BSG0 188 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
LDLRAP1-201ENST00000374338 ANKRD17O75179 2603 aaKnown RBP13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 SONP18583 2426 aaKnown RBP13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 LMO4P61968 165 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 ITLN2Q8WWU7 325 aaPredicted RBP13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 Q8N1Y9 231 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 Q8N6K4 173 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
LDLRAP1-201ENST00000374338 TRAV12-1A0A0B4J245 112 aa13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 CFC1BP0CG36 223 aa13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 CFC1P0CG37 223 aa13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
LDLRAP1-201ENST00000374338 TRBV12-3P01733 135 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 CSDC2Q9Y534 153 aaKnown RBP13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 SLC25A16P16260 332 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 EMP1P54849 157 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 MAPK1IP1LQ8NDC0 245 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 LINC01587Q99440 93 aa13.14□□□□□ -0.31
LDLRAP1-201ENST00000374338 Q6ZS46 218 aa13.13□□□□□ -0.31
LDLRAP1-201ENST00000374338 TRPT1Q86TN4 253 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-201ENST00000374338 CCDC140Q96MF4 163 aa13.13□□□□□ -0.31
LDLRAP1-201ENST00000374338 IL17RELQ6ZVW7 336 aa13.13□□□□□ -0.31
LDLRAP1-201ENST00000374338 COX8CQ7Z4L0 72 aa13.13□□□□□ -0.31
LDLRAP1-201ENST00000374338 COX6B1P14854 86 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 NF1P21359 2839 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 CHCHD5Q9BSY4 110 aa13.12□□□□□ -0.31
LDLRAP1-201ENST00000374338 NPFFO15130 113 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 IGF1P05019 195 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 NRACQ8N912 160 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 NBPF19A0A087WUL8 3843 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 UBE2E1P51965 193 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 C5orf47Q569G3 176 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
LDLRAP1-201ENST00000374338 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
LDLRAP1-201ENST00000374338 NEXN-AS1Q8NBZ9 246 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 PRO1854Q9UHT4 67 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 A0A0J9YY99 117 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 TEX49A0A1B0GTD5 131 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 EDN2P20800 178 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 CLPSL1A2RUU4 121 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 MINOS1Q5TGZ0 78 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 MINOS1-NBL1R4GNA1 71 aa13.09□□□□□ -0.31
LDLRAP1-201ENST00000374338 NAV2Q8IVL1 2488 aa13.08□□□□□ -0.31
LDLRAP1-201ENST00000374338 LINC00694P0DN24 101 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 BLCAPP62952 87 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 UNQ9165/PRO28630Q6UXU0 137 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 SCGB3A1Q96QR1 104 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 USP24Q9UPU5 2620 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 BUB3O43684 328 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
LDLRAP1-201ENST00000374338 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
LDLRAP1-201ENST00000374338 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
LDLRAP1-201ENST00000374338 EBI3Q14213 229 aa13.07□□□□□ -0.32
LDLRAP1-201ENST00000374338 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
LDLRAP1-201ENST00000374338 SPXQ9BT56 116 aa13.07□□□□□ -0.32
LDLRAP1-201ENST00000374338 PRB1P04280 392 aa13.06□□□□□ -0.32
LDLRAP1-201ENST00000374338 PDE6HQ13956 83 aa13.06□□□□□ -0.32
LDLRAP1-201ENST00000374338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.06□□□□□ -0.32
LDLRAP1-201ENST00000374338 NIPBLQ6KC79 2804 aaeCLIP13.06□□□□□ -0.326e-6■■■□□ 16.7
LDLRAP1-201ENST00000374338 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
LDLRAP1-201ENST00000374338 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
LDLRAP1-201ENST00000374338 IGHV4-30-2A0A087WSY4 118 aa13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 F6UB75 175 aa13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms