RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 DNAJC9-AS1A6NH13 148 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 IGKCP01834 107 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 HHLA3Q9XRX5 114 aa11.84□□□□□ -0.51
CNKSR1-202ENST00000374253 SUMO4Q6EEV6 95 aa11.83□□□□□ -0.52
CNKSR1-202ENST00000374253 Q8N2B8 174 aa11.83□□□□□ -0.52
CNKSR1-202ENST00000374253 ZC2HC1BQ5TFG8 222 aa11.83□□□□□ -0.52
CNKSR1-202ENST00000374253 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
CNKSR1-202ENST00000374253 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 CBY3A6NI87 242 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 ATP5LO75964 103 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 BOD1L2Q8IYS8 172 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 DEFB125Q8N687 156 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 KMT2BQ9UMN6 2715 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 NXPH4O95158 308 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
CNKSR1-202ENST00000374253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 FOXI2Q6ZQN5 318 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 ZMAT4Q9H898 229 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 DPM2O94777 84 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 C2orf66Q6UXQ4 117 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 C20orf78Q9BR46 151 aa11.81□□□□□ -0.52
CNKSR1-202ENST00000374253 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 ZNF56Q15929 161 aa11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 DYNLRB2Q8TF09 96 aa11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
CNKSR1-202ENST00000374253 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 DUSP14O95147 198 aaKnown RBP11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 TMEM97Q5BJF2 176 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 ZNF876PQ49A33 203 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
CNKSR1-202ENST00000374253 RPL39P62891 51 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 CD300EQ496F6 205 aaPredicted RBP11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 A0A087WX48 190 aa11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 PLA2G2AP14555 144 aa11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
CNKSR1-202ENST00000374253 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 CD28P10747 220 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 EMP1P54849 157 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 GAGE1Q13065 139 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 H3BMM0 161 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 CCL25O15444 150 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
CNKSR1-202ENST00000374253 K7EP13 123 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 CRYGDP07320 174 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 NAA38Q9BRA0 125 aaKnown RBP11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 VAMP3Q15836 100 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 POM121L12Q8N7R1 296 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 BAALCQ8WXS3 180 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 TP53TG1Q9Y2A0 90 aa11.76□□□□□ -0.53
CNKSR1-202ENST00000374253 K7EMI3 77 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 PROK1P58294 105 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 SYT8Q8NBV8 401 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 CHTOPQ9Y3Y2 248 aaKnown RBP11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 J3QKU1 62 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
CNKSR1-202ENST00000374253 POLR2KP53803 58 aaKnown RBP11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 ZFP2Q6ZN57 461 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 NACAE9PAV3 2078 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 P0DMU3 169 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 FAM231AP0DMU4 169 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 FAM231CP0DMU5 169 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 SMR3AQ99954 134 aa11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
CNKSR1-202ENST00000374253 PRSS29PA6NIE9 313 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 F8VRH5 84 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 H7C1H1 209 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 M0QY20 66 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 HIVEP2P31629 2446 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 PPP1R17O96001 155 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 TSHBP01222 138 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms