RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 IGHV3-30P01768 117 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 IGHV3-33P01772 117 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 LINC00694P0DN24 101 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 IGHV3-30-3P0DP02 117 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 IGHV3-30-5P0DP03 117 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 GCSHP23434 173 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 RAB5CP51148 216 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 FAM74A4Q5TZK3 123 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
TMEM53-201ENST00000372235 M0R381 172 aa12.68□□□□□ -0.38
TMEM53-201ENST00000372235 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
TMEM53-201ENST00000372235 Q6ZSN1 163 aa12.68□□□□□ -0.38
TMEM53-201ENST00000372235 BAGE2Q86Y30 109 aa12.68□□□□□ -0.38
TMEM53-201ENST00000372235 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.68□□□□□ -0.38
TMEM53-201ENST00000372235 MANBALQ9NQG1 85 aa12.68□□□□□ -0.38
TMEM53-201ENST00000372235 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
TMEM53-201ENST00000372235 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
TMEM53-201ENST00000372235 RMI2Q96E14 147 aa12.67□□□□□ -0.38
TMEM53-201ENST00000372235 SAMD10Q9BYL1 202 aa12.67□□□□□ -0.38
TMEM53-201ENST00000372235 JPT2Q9H910 190 aa12.67□□□□□ -0.38
TMEM53-201ENST00000372235 Q9HAA7 133 aa12.67□□□□□ -0.38
TMEM53-201ENST00000372235 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
TMEM53-201ENST00000372235 ELOBQ15370 118 aa12.66□□□□□ -0.38
TMEM53-201ENST00000372235 C14orf178Q8N769 122 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-201ENST00000372235 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
TMEM53-201ENST00000372235 KRTAP4-5Q9BYR2 181 aa12.66□□□□□ -0.38
TMEM53-201ENST00000372235 IGLV5-52A0A0A0MRZ9 124 aa12.65□□□□□ -0.38
TMEM53-201ENST00000372235 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
TMEM53-201ENST00000372235 EPM2AB3EWF7 344 aa12.65□□□□□ -0.38
TMEM53-201ENST00000372235 TMUB2Q71RG4 321 aa12.65□□□□□ -0.38
TMEM53-201ENST00000372235 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
TMEM53-201ENST00000372235 HSPG2P98160 4391 aa12.65□□□□□ -0.39
TMEM53-201ENST00000372235 A0A087WWL8 130 aa12.64□□□□□ -0.39
TMEM53-201ENST00000372235 TRAV1-1A0A0B4J248 108 aa12.64□□□□□ -0.39
TMEM53-201ENST00000372235 SCO2A0A1W2PP80 73 aa12.64□□□□□ -0.39
TMEM53-201ENST00000372235 RAB4BP61018 213 aa12.64□□□□□ -0.39
TMEM53-201ENST00000372235 Q8N814 137 aa12.64□□□□□ -0.39
TMEM53-201ENST00000372235 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
TMEM53-201ENST00000372235 A0A1B0GV50 99 aa12.63□□□□□ -0.39
TMEM53-201ENST00000372235 OR5AL1P0C617 328 aa12.62□□□□□ -0.39
TMEM53-201ENST00000372235 PKIAP61925 76 aa12.62□□□□□ -0.39
TMEM53-201ENST00000372235 SPANXN1Q5VSR9 72 aa12.62□□□□□ -0.39
TMEM53-201ENST00000372235 FRZBQ92765 325 aa12.62□□□□□ -0.39
TMEM53-201ENST00000372235 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
TMEM53-201ENST00000372235 A0A087WX48 190 aa12.61□□□□□ -0.39
TMEM53-201ENST00000372235 SNAI2O43623 268 aa12.61□□□□□ -0.39
TMEM53-201ENST00000372235 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
TMEM53-201ENST00000372235 SMIM12Q96EX1 92 aa12.61□□□□□ -0.39
TMEM53-201ENST00000372235 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-201ENST00000372235 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
TMEM53-201ENST00000372235 IFNA1P01562 189 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 C1QBP02746 253 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 RPL35P42766 123 aaKnown RBP12.6□□□□□ -0.39
TMEM53-201ENST00000372235 XGP55808 180 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 KRTAP10-1P60331 282 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 C11orf52Q96A22 123 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
TMEM53-201ENST00000372235 BIN3Q9NQY0 253 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 ABCA13Q86UQ4 5058 aa12.6□□□□□ -0.39
TMEM53-201ENST00000372235 PDE6DO43924 150 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
TMEM53-201ENST00000372235 RPS20P60866 119 aaKnown RBP12.59□□□□□ -0.39
TMEM53-201ENST00000372235 UBE2D3P61077 147 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 UBE2D2P62837 147 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 ZNF56Q15929 161 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 NIT1Q86X76 327 aa12.59□□□□□ -0.39
TMEM53-201ENST00000372235 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
TMEM53-201ENST00000372235 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
TMEM53-201ENST00000372235 Q0VG73 95 aa12.58□□□□□ -0.4
TMEM53-201ENST00000372235 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
TMEM53-201ENST00000372235 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
TMEM53-201ENST00000372235 SULT1A2P50226 295 aa12.57□□□□□ -0.4
TMEM53-201ENST00000372235 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
TMEM53-201ENST00000372235 OR10AG1Q8NH19 301 aa12.57□□□□□ -0.4
TMEM53-201ENST00000372235 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
TMEM53-201ENST00000372235 Q9UF83 564 aa12.57□□□□□ -0.4
TMEM53-201ENST00000372235 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
TMEM53-201ENST00000372235 Q8N976 141 aa12.56□□□□□ -0.4
TMEM53-201ENST00000372235 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
TMEM53-201ENST00000372235 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 F5H697 171 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 FAM229AH3BQW9 127 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 GNG4P50150 75 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 CCL20P78556 96 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 MEF2BQ02080 365 aaPredicted RBP12.55□□□□□ -0.4
TMEM53-201ENST00000372235 SLC51BQ86UW2 128 aa12.55□□□□□ -0.4
TMEM53-201ENST00000372235 TMEM262E9PQX1 116 aa12.54□□□□□ -0.4
TMEM53-201ENST00000372235 H7C1H1 209 aa12.54□□□□□ -0.4
TMEM53-201ENST00000372235 CACNG7P62955 275 aa12.54□□□□□ -0.4
TMEM53-201ENST00000372235 CENPWQ5EE01 88 aa12.54□□□□□ -0.4
TMEM53-201ENST00000372235 KLK12Q9UKR0 248 aa12.54□□□□□ -0.4
TMEM53-201ENST00000372235 IGKV2D-24A0A075B6R9 120 aa12.53□□□□□ -0.4
TMEM53-201ENST00000372235 F2Z2F3 143 aa12.53□□□□□ -0.4
TMEM53-201ENST00000372235 Q8N3U1 123 aa12.53□□□□□ -0.4
TMEM53-201ENST00000372235 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms