RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 HLA-DRB4P13762 266 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 C4orf3Q8WVX3 66 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 HLA-DRB4X5D2U9 266 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 SPRY2O43597 315 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 PLNP26678 52 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
ECM1-202ENST00000369047 RPL39LQ96EH5 51 aaKnown RBP9.78□□□□□ -0.84
ECM1-202ENST00000369047 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
ECM1-202ENST00000369047 DUX5Q96PT3 197 aa9.77□□□□□ -0.85
ECM1-202ENST00000369047 SCGB3A1Q96QR1 104 aa9.77□□□□□ -0.85
ECM1-202ENST00000369047 NSD1Q96L73 2696 aaPredicted RBP9.76□□□□□ -0.85
ECM1-202ENST00000369047 FN1P02751 2386 aaKnown RBP9.76□□□□□ -0.85
ECM1-202ENST00000369047 H7C1H1 209 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 NPSP0C0P6 89 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 NMUP48645 174 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 ADAMTSL5Q6ZMM2 481 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 MUC4Q99102 2169 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 ANK3Q12955 4377 aaKnown RBP9.76□□□□□ -0.85
ECM1-202ENST00000369047 HSD52Q0P140 79 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 CSTL1Q9H114 145 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 ZANQ9Y493 2812 aa9.76□□□□□ -0.85
ECM1-202ENST00000369047 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 DNAJC9-AS1A6NH13 148 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 VCYO14598 125 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 TAX1BP3O14907 124 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
ECM1-202ENST00000369047 SLURP1P55000 103 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 UBE2V1Q13404 147 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 ZNF124Q15973 351 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 Q8N1Y9 231 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 OR11H1Q8NG94 326 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 MRPL35Q9NZE8 188 aaKnown RBP9.75□□□□□ -0.85
ECM1-202ENST00000369047 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 TRBV6-5A0A0K0K1A5 114 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 A8MTW9 85 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
ECM1-202ENST00000369047 SPINK13Q1W4C9 94 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 C2orf66Q6UXQ4 117 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 ERASQ7Z444 233 aa9.75□□□□□ -0.85
ECM1-202ENST00000369047 A6NDN8 102 aa9.74□□□□□ -0.85
ECM1-202ENST00000369047 F8VRH5 84 aa9.74□□□□□ -0.85
ECM1-202ENST00000369047 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
ECM1-202ENST00000369047 PCP2Q8IVA1 136 aa9.74□□□□□ -0.85
ECM1-202ENST00000369047 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
ECM1-202ENST00000369047 F5H697 171 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 MDFICQ9P1T7 246 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 MXRA5Q9NR99 2828 aa9.73□□□□□ -0.85
ECM1-202ENST00000369047 CHTOPQ9Y3Y2 248 aaKnown RBP9.73□□□□□ -0.85
ECM1-202ENST00000369047 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 JPT2Q9H910 190 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
ECM1-202ENST00000369047 A0A087WWL8 130 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 DEFB131AP59861 70 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 Q6ZSV7 163 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 Q6ZVH6 145 aa9.71□□□□□ -0.85
ECM1-202ENST00000369047 H3BMM0 161 aa9.71□□□□□ -0.86
ECM1-202ENST00000369047 CRYGDP07320 174 aa9.71□□□□□ -0.86
ECM1-202ENST00000369047 ESM1Q9NQ30 184 aa9.71□□□□□ -0.86
ECM1-202ENST00000369047 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
ECM1-202ENST00000369047 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.86
ECM1-202ENST00000369047 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 CBY3A6NI87 242 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 CCL25O15444 150 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 TCTAP57738 103 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 VAMP3Q15836 100 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
ECM1-202ENST00000369047 KLHL30-AS1Q8NEE0 82 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 BAALCQ8WXS3 180 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
ECM1-202ENST00000369047 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 H3BRM9 83 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 M0QY20 66 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 KHDC1LQ5JSQ8 128 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 TMEM61Q8N0U2 210 aa9.7□□□□□ -0.86
ECM1-202ENST00000369047 MTORP42345 2549 aa9.69□□□□□ -0.86
ECM1-202ENST00000369047 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
ECM1-202ENST00000369047 KNCNA6PVL3 124 aa9.69□□□□□ -0.86
ECM1-202ENST00000369047 DEFB114Q30KQ6 69 aa9.69□□□□□ -0.86
ECM1-202ENST00000369047 FAM74A4Q5TZK3 123 aa9.69□□□□□ -0.86
ECM1-202ENST00000369047 PTH2Q96A98 100 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms