RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DPM2O94777 84 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 HINT1P49773 126 aaPredicted RBP10.41□□□□□ -0.74
USF1-202ENST00000368020 SLURP1P55000 103 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 IGKCP01834 107 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 PLNP26678 52 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 KHDC1LQ5JSQ8 128 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 STPG4Q8N801 248 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 KLHL30-AS1Q8NEE0 82 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 MUC4Q99102 2169 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 TRAV12-1A0A0B4J245 112 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 Q6ZSV7 163 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
USF1-202ENST00000368020 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
USF1-202ENST00000368020 ADAMTSL5Q6ZMM2 481 aa10.39□□□□□ -0.75
USF1-202ENST00000368020 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
USF1-202ENST00000368020 NDUFA7O95182 113 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
USF1-202ENST00000368020 LINC00315P59091 139 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 DEFB136Q30KP8 78 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 Q8N1Y9 231 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 SPAG8Q99932 426 aaPredicted RBP10.38□□□□□ -0.75
USF1-202ENST00000368020 C16orf95Q9H693 158 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 DKK2Q9UBU2 259 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 A0A087WX48 190 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 IGKV3-20P01619 116 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
USF1-202ENST00000368020 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 VCYO14598 125 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 FGF6P10767 208 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 DEFB131AP59861 70 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 SEC11AP67812 179 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 BVES-AS1Q5T3Y7 98 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
USF1-202ENST00000368020 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
USF1-202ENST00000368020 H3BMM0 161 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 H7C1H1 209 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 TMEM61Q8N0U2 210 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
USF1-202ENST00000368020 F5H697 171 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 ERASQ7Z444 233 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
USF1-202ENST00000368020 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
USF1-202ENST00000368020 ATRQ13535 2644 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 CBY3A6NI87 242 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 F8VRH5 84 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 NMUP48645 174 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
USF1-202ENST00000368020 HSD52Q0P140 79 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 FHL3Q13643 280 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
USF1-202ENST00000368020 PTH2Q96A98 100 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 RAX2Q96IS3 184 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 COX11Q9Y6N1 276 aa10.35□□□□□ -0.75
USF1-202ENST00000368020 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 LINC01006Q8NI28 216 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 EDA2RQ9HAV5 297 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 AGRNO00468 2067 aa10.34□□□□□ -0.75
USF1-202ENST00000368020 SPRY2O43597 315 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
USF1-202ENST00000368020 ZNF56Q15929 161 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
USF1-202ENST00000368020 HIGD1BQ9P298 99 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
USF1-202ENST00000368020 A0A087WWL8 130 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 ZNF415Q09FC8 603 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 PAPPA-AS1Q5QFB9 102 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 ZC2HC1BQ5TFG8 222 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 TMEM141Q96I45 108 aa10.33□□□□□ -0.76
USF1-202ENST00000368020 A6NDN8 102 aa10.32□□□□□ -0.76
USF1-202ENST00000368020 SDHAF1A6NFY7 115 aa10.32□□□□□ -0.76
USF1-202ENST00000368020 CCL24O00175 119 aa10.32□□□□□ -0.76
USF1-202ENST00000368020 CRYGDP07320 174 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms