RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 KIAA1644Q3SXP7 199 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 FAM74A4Q5TZK3 123 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 FAM104BQ5XKR9 115 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 Q8NAQ8 132 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 RASL10AQ92737 203 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 DPH3P1Q9H4G8 78 aa15.68■□□□□ 0.1
HOXA4-201ENST00000360046 LGALS9BQ3B8N2 356 aa15.67■□□□□ 0.1
HOXA4-201ENST00000360046 PIK3CD-AS1Q5SR53 167 aa15.67■□□□□ 0.1
HOXA4-201ENST00000360046 MEGF8Q7Z7M0 2845 aa15.67■□□□□ 0.1
HOXA4-201ENST00000360046 TENM3Q9P273 2699 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BKO60814 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BJP06899 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 MGPP08493 103 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BOP23527 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BBP33778 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BDP58876 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BCP62807 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST2H2BEQ16778 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BHQ93079 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BNQ99877 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 HIST1H2BMQ99879 126 aa15.66■□□□□ 0.1
HOXA4-201ENST00000360046 A8MWV9 139 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 NDUFA6P56556 154 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 SPATA25Q9BR10 227 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 SAMD10Q9BYL1 202 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 GAGE12BA1L429 117 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 GAGE7O76087 117 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 GAGE12FP0CL80 117 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 GAGE12GP0CL81 117 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 GAGE12IP0CL82 117 aa15.65■□□□□ 0.1
HOXA4-201ENST00000360046 RAB4AP20338 218 aa15.64■□□□□ 0.09
HOXA4-201ENST00000360046 RNF185Q96GF1 192 aa15.64■□□□□ 0.09
HOXA4-201ENST00000360046 NDUFAF3Q9BU61 184 aa15.64■□□□□ 0.09
HOXA4-201ENST00000360046 PHOX2AO14813 284 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 S100A2P29034 98 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 MRPL51Q4U2R6 128 aaKnown RBP15.63■□□□□ 0.09
HOXA4-201ENST00000360046 CFAP126Q5VTH2 177 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 KIF25-AS1Q9Y6Z4 181 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 TRGV2A0A075B6R0 118 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 CRYGDP07320 174 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 FAM222AQ5U5X8 452 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 TM2D3Q9BRN9 247 aa15.63■□□□□ 0.09
HOXA4-201ENST00000360046 NACAE9PAV3 2078 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 IGHV3-73A0A0B4J1V6 119 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 F5H697 171 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 DEFB130BP0DP73 79 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 DEFB130AP0DP74 79 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 ZNF56Q15929 161 aa15.62■□□□□ 0.09
HOXA4-201ENST00000360046 LYRM9A8MSI8 78 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 D6R8Y8 96 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 RS1O15537 224 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 OR4C5Q8NGB2 326 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 B9D2Q9BPU9 175 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 ZMAT4Q9H898 229 aa15.61■□□□□ 0.09
HOXA4-201ENST00000360046 TRAV26-2A0A0B4J265 109 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 SMKR1H3BMG3 65 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 NCR2O95944 276 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 SRIP30626 198 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 CKS2P33552 79 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 DKK2Q9UBU2 259 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 PCP4L1A6NKN8 68 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 IGHV3-53P01767 116 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 LINC00315P59091 139 aa15.6■□□□□ 0.09
HOXA4-201ENST00000360046 ORMDL3Q8N138 153 aa15.59■□□□□ 0.09
HOXA4-201ENST00000360046 POM121L12Q8N7R1 296 aa15.59■□□□□ 0.09
HOXA4-201ENST00000360046 TRAV4A0A0B4J268 109 aa15.58■□□□□ 0.08
HOXA4-201ENST00000360046 RHODO00212 210 aa15.58■□□□□ 0.08
HOXA4-201ENST00000360046 CELA1Q9UNI1 258 aa15.58■□□□□ 0.08
HOXA4-201ENST00000360046 MRAP2Q96G30 205 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 ZNF479Q96JC4 524 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 ALKBH7Q9BT30 221 aaPredicted RBP15.57■□□□□ 0.08
HOXA4-201ENST00000360046 SPART-AS1P0CW21 52 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 SUMO4Q6EEV6 95 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 UFSP1Q6NVU6 142 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 HIST3H2BBQ8N257 126 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 LINC00612Q8N6U2 182 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 PRELID3AQ96N28 172 aa15.57■□□□□ 0.08
HOXA4-201ENST00000360046 GAS8-AS1O95177 125 aa15.56■□□□□ 0.08
HOXA4-201ENST00000360046 PPBPP02775 128 aa15.56■□□□□ 0.08
HOXA4-201ENST00000360046 COA6Q5JTJ3 125 aaKnown RBP15.56■□□□□ 0.08
HOXA4-201ENST00000360046 ZFP2Q6ZN57 461 aa15.56■□□□□ 0.08
HOXA4-201ENST00000360046 C11orf68Q9H3H3 251 aaKnown RBP15.56■□□□□ 0.08
HOXA4-201ENST00000360046 U3KQK5 164 aa15.56■□□□□ 0.08
HOXA4-201ENST00000360046 GATA1P15976 413 aaPredicted RBP15.55■□□□□ 0.08
HOXA4-201ENST00000360046 DAD1P61803 113 aa15.55■□□□□ 0.08
HOXA4-201ENST00000360046 NIT2Q9NQR4 276 aa15.55■□□□□ 0.08
HOXA4-201ENST00000360046 COL7A1Q02388 2944 aa15.55■□□□□ 0.08
HOXA4-201ENST00000360046 A0A0J9YWU9 116 aa15.54■□□□□ 0.08
HOXA4-201ENST00000360046 TEX48A0A1B0GUV7 120 aa15.54■□□□□ 0.08
HOXA4-201ENST00000360046 NPYP01303 97 aa15.52■□□□□ 0.08
HOXA4-201ENST00000360046 C18orf15Q96N68 181 aa15.52■□□□□ 0.08
HOXA4-201ENST00000360046 IFITM10A6NMD0 228 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 Q6ZSN1 163 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 RPL39LQ96EH5 51 aaKnown RBP15.51■□□□□ 0.07
HOXA4-201ENST00000360046 TRGV4A0A0C4DH28 118 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 TNFRSF6BO95407 300 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 IQCJQ1A5X6 159 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 C18orf32Q8TCD1 76 aa15.51■□□□□ 0.07
HOXA4-201ENST00000360046 HUWE1Q7Z6Z7 4374 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms