RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
LIMK2-203ENST00000340552 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 H3BMM0 161 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
LIMK2-203ENST00000340552 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 ASH1LQ9NR48 2969 aaKnown RBP11.64□□□□□ -0.55
LIMK2-203ENST00000340552 P0DMU3 169 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
LIMK2-203ENST00000340552 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
LIMK2-203ENST00000340552 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
LIMK2-203ENST00000340552 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
LIMK2-203ENST00000340552 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
LIMK2-203ENST00000340552 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
LIMK2-203ENST00000340552 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
LIMK2-203ENST00000340552 ATXN8Q156A1 80 aa11.63□□□□□ -0.55
LIMK2-203ENST00000340552 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
LIMK2-203ENST00000340552 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
LIMK2-203ENST00000340552 BBC3Q96PG8 261 aaPredicted RBP11.63□□□□□ -0.55
LIMK2-203ENST00000340552 ZNF56Q15929 161 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 AMELXQ99217 191 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 MYO18BQ8IUG5 2567 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 LOC107984640A0A0U1RRK4 108 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 DNAJC30Q96LL9 226 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 HERVK_113P61574 105 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
LIMK2-203ENST00000340552 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
LIMK2-203ENST00000340552 C5orf47Q569G3 176 aa11.61□□□□□ -0.55
LIMK2-203ENST00000340552 F8W735 103 aaPredicted RBP11.61□□□□□ -0.55
LIMK2-203ENST00000340552 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
LIMK2-203ENST00000340552 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
LIMK2-203ENST00000340552 BEX4Q9NWD9 120 aaPredicted RBP11.61□□□□□ -0.55
LIMK2-203ENST00000340552 IGHV3OR16-8A0A075B7F1 116 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 TSHBP01222 138 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 RNF5Q99942 180 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 IGHV4-4A0A075B6R2 117 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 SPRY2O43597 315 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 LMO4P61968 165 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 IGFBPL1Q8WX77 278 aa11.6□□□□□ -0.55
LIMK2-203ENST00000340552 IGHV3-23P01764 117 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 Q1RN00 199 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 CCL19Q99731 98 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 SPG11Q96JI7 2443 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 ZNF462Q96JM2 2506 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 TRBV7-7A0A0K0K1E9 115 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 SIRPDQ9H106 197 aa11.59□□□□□ -0.55
LIMK2-203ENST00000340552 A0A0B4J2C4 111 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 M0R2P5 195 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 OOSP1A8MZH6 123 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 C2orf82Q6UX34 121 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 DUX3Q96PT4 197 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
LIMK2-203ENST00000340552 FAM236AA0A1B0GUQ0 79 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 FAM236BA0A1B0GV22 79 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 TRIAP1O43715 76 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 MFAP4P55083 255 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 EPG5Q9HCE0 2579 aa11.57□□□□□ -0.56
LIMK2-203ENST00000340552 J3QQQ9 107 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 CEMP1Q6PRD7 247 aaPredicted RBP11.56□□□□□ -0.56
LIMK2-203ENST00000340552 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 ZNF843Q8N446 348 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 DEFB104AQ8WTQ1 72 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 H7C423 109 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 EBI3Q14213 229 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 HES1Q14469 280 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 SMIM9A6NGZ8 99 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 NBR2O15453 112 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 C9orf153Q5TBE3 101 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
LIMK2-203ENST00000340552 MINOS1Q5TGZ0 78 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 MINOS1-NBL1R4GNA1 71 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 IGHV3-35A0A0C4DH35 117 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 M0R381 172 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 NDUFA7O95182 113 aa11.55□□□□□ -0.56
LIMK2-203ENST00000340552 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
LIMK2-203ENST00000340552 LGALS3P17931 250 aaKnown RBP11.54□□□□□ -0.56
LIMK2-203ENST00000340552 PMVKQ15126 192 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
LIMK2-203ENST00000340552 FAM208BQ5VWN6 2430 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 NPFFO15130 113 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 NPBQ8NG41 125 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 VPS13CQ709C8 3753 aa11.54□□□□□ -0.56
LIMK2-203ENST00000340552 IGIPA6NJ69 53 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms