RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ASPHD1Q5U4P2 390 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
LIN54-201ENST00000340417 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
LIN54-201ENST00000340417 PMVKQ15126 192 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 FAM231DQ6ZW35 169 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 WFDC10AQ9H1F0 79 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
LIN54-201ENST00000340417 TTC32Q5I0X7 151 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 ZNF503Q96F45 646 aa9.68□□□□□ -0.86
LIN54-201ENST00000340417 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 NXPH4O95158 308 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KLF12Q9Y4X4 402 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 ARHGAP32A7KAX9 2087 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KIR2DL5BA0A0G2JN68 375 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KIR2DL5BA0A0G2JPC4 375 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KIR2DL5AQ8N109 375 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KIR2DL5BQ8NHK3 375 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 VSIG2Q96IQ7 327 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 KLK12Q9UKR0 248 aa9.67□□□□□ -0.86
LIN54-201ENST00000340417 LEPROTO15243 131 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 TNCP24821 2201 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 U3KQK5 164 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 TSPAN13O95857 204 aa9.66□□□□□ -0.86
LIN54-201ENST00000340417 M0R2N4 97 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 FABP2P12104 132 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 SUMO4Q6EEV6 95 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 IGLV2-18A0A075B6J9 118 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 HERVK_113P63121 156 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 IL15RAQ13261 267 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 Q6ZPA2 131 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 C20orf78Q9BR46 151 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 hDV102S1A0JD36 115 aa9.65□□□□□ -0.86
LIN54-201ENST00000340417 A0A0J9YWU9 116 aa9.65□□□□□ -0.87
LIN54-201ENST00000340417 IGLC2P0DOY2 106 aa9.65□□□□□ -0.87
LIN54-201ENST00000340417 EDA2RQ9HAV5 297 aa9.65□□□□□ -0.87
LIN54-201ENST00000340417 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 Q6ZTI0 123 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 MDFICQ9P1T7 246 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 BRWD1-AS2P59051 145 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 SMIM6P0DI80 62 aa9.64□□□□□ -0.87
LIN54-201ENST00000340417 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 IGKV1D-37A0A075B6S9 117 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 TIRAPP58753 221 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 CRYGDP07320 174 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 C5orf38Q86SI9 138 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
LIN54-201ENST00000340417 COX7A2LO14548 114 aa9.62□□□□□ -0.87
LIN54-201ENST00000340417 ZFAND3Q9H8U3 227 aa9.62□□□□□ -0.87
LIN54-201ENST00000340417 Q0VG73 95 aa9.62□□□□□ -0.87
LIN54-201ENST00000340417 V9GYV3 84 aa9.62□□□□□ -0.87
LIN54-201ENST00000340417 CXCL1P09341 107 aa9.62□□□□□ -0.87
LIN54-201ENST00000340417 PAX2Q02962 417 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 SMIM27A0A1W2PRY6 76 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 NPYP01303 97 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 P0DMU3 169 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 NANOS2P60321 138 aaKnown RBP9.61□□□□□ -0.87
LIN54-201ENST00000340417 P0C879 139 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
LIN54-201ENST00000340417 GAGE2BQ13066 116 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
LIN54-201ENST00000340417 G3V4G9 280 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 ABCA12Q86UK0 2595 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 PROK1P58294 105 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 COX11Q9Y6N1 276 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 RETNQ9HD89 108 aa9.6□□□□□ -0.87
LIN54-201ENST00000340417 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
LIN54-201ENST00000340417 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
LIN54-201ENST00000340417 NHLRC4P0CG21 123 aaPredicted RBP9.59□□□□□ -0.87
LIN54-201ENST00000340417 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
LIN54-201ENST00000340417 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
LIN54-201ENST00000340417 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
LIN54-201ENST00000340417 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
LIN54-201ENST00000340417 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
LIN54-201ENST00000340417 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
LIN54-201ENST00000340417 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
LIN54-201ENST00000340417 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
LIN54-201ENST00000340417 CPAMD8Q8IZJ3 1885 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms