RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 Q6ZR54 194 aa7.83□□□□□ -1.16
SLC28A1-202ENST00000338602 PARLQ9H300 379 aa7.83□□□□□ -1.16
SLC28A1-202ENST00000338602 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
SLC28A1-202ENST00000338602 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
SLC28A1-202ENST00000338602 LYPD5Q6UWN5 251 aa7.82□□□□□ -1.16
SLC28A1-202ENST00000338602 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
SLC28A1-202ENST00000338602 A0A1W2PPQ1 181 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 ZNF727A8MUV8 499 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 SIVA1O15304 175 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 SCO1O75880 301 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 P01737 135 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 RPL19P84098 196 aaKnown RBP7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 OR2D3Q8NGH3 330 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 SFRP2Q96HF1 295 aa7.81□□□□□ -1.16
SLC28A1-202ENST00000338602 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 NXPH4O95158 308 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 IGLV2-8P01709 118 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 OR5AL1P0C617 328 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 TMEM241Q24JQ0 296 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 FAM74A4Q5TZK3 123 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 SVBPQ8N300 66 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 CLRN3Q8NCR9 226 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
SLC28A1-202ENST00000338602 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 LOC100131303A0A0U1RQF7 123 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 SNAI2O43623 268 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 TIRAPP58753 221 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 C6orf223Q8N319 242 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 TPPP3Q9BW30 176 aa7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
SLC28A1-202ENST00000338602 DNAH2Q9P225 4427 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 A0A087WWL8 130 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 TRAV8-6A0A0B4J262 113 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 C19orf71A6NCJ1 209 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 PRSS29PA6NIE9 313 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 F2Z2F3 143 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 K7EP13 123 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 SNAPINO95295 136 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 SMIM17P0DL12 118 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 FER1L6-AS1Q8NA97 138 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 SAMD10Q9BYL1 202 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 JPT2Q9H910 190 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 NAT8Q9UHE5 227 aa7.78□□□□□ -1.16
SLC28A1-202ENST00000338602 RTL8CO15255 209 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 EVI2AP22794 236 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 CACNG7P62955 275 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 UFSP1Q6NVU6 142 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 OR10AG1Q8NH19 301 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 LY96Q9Y6Y9 160 aa7.77□□□□□ -1.17
SLC28A1-202ENST00000338602 C7orf77A4D0Y5 90 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GAGE12JA6NER3 117 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 CRYGDP07320 174 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 RAB4BP61018 213 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 SSTP61278 116 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GAGE1Q13065 139 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GAGE4Q13068 117 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GAGE5Q13069 117 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 ADIRFQ15847 76 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 NUDT10Q8NFP7 164 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 NUDT11Q96G61 164 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 AP1S3Q96PC3 154 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
SLC28A1-202ENST00000338602 TRBV10-1A0A0K0K1A3 114 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 F5H697 171 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 GZMBP10144 247 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 ZNF56Q15929 161 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 LELP1Q5T871 98 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 Q6ZSN1 163 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 C14orf178Q8N769 122 aaPredicted RBP7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 RPS10P5Q9NQ39 176 aa7.75□□□□□ -1.17
SLC28A1-202ENST00000338602 A0A087WWC5 75 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 MUC21A0A140T8X8 626 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 GATCO43716 136 aaKnown RBP7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 C10orf126Q8N4M7 172 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 DNAH17Q9UFH2 4485 aa7.74□□□□□ -1.17
SLC28A1-202ENST00000338602 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
SLC28A1-202ENST00000338602 K7EN84 100 aa7.73□□□□□ -1.17
SLC28A1-202ENST00000338602 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
SLC28A1-202ENST00000338602 DNAH10OSP0CZ25 163 aa7.73□□□□□ -1.17
SLC28A1-202ENST00000338602 ERVFC1-1P60608 527 aa7.73□□□□□ -1.17
SLC28A1-202ENST00000338602 RHEBQ15382 184 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms