RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF843Q8N446 348 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 PLEKHB2Q96CS7 222 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 A0A087WX48 190 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 NAV2Q8IVL1 2488 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 MORN3Q6PF18 240 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-202ENST00000338368 RPL39LQ96EH5 51 aaKnown RBP4.79□□□□□ -1.64
PRKDC-202ENST00000338368 IGHV3-38A0A0C4DH36 116 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 PRSS29PA6NIE9 313 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 F8VRH5 84 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 CRIP1P50238 77 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 WFDC11Q8NEX6 87 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 A0A0J9YX75 114 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 AVPP01185 164 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 IGHV4-31P0DP07 118 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 GAGE4Q13068 117 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 GAGE5Q13069 117 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 GAGE13Q4V321 117 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 COX11Q9Y6N1 276 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 PCNTO95613 3336 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 CFHR3Q02985 330 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 Q6YL49 198 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 TMEM61Q8N0U2 210 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 C14orf177Q52M58 125 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 SUMO4Q6EEV6 95 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 C10orf99Q6UWK7 81 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 Q8N1Y9 231 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 ANAPC13Q9BS18 74 aa4.78□□□□□ -1.64
PRKDC-202ENST00000338368 SIVA1O15304 175 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 MRGPRG-AS1Q2M3A8 158 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 RASL10AQ92737 203 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 DLX4Q92988 240 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 VWC2LB2RUY7 222 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE7O76087 117 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE12FP0CL80 117 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE12GP0CL81 117 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE12IP0CL82 117 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 DEFB121Q5J5C9 76 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 JPT2Q9H910 190 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 HTTP42858 3142 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 K7EQG2 157 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 CKS1BP61024 79 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 U3KQE9 123 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-202ENST00000338368 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 BRCA2P51587 3418 aa4.77□□□□□ -1.65
PRKDC-202ENST00000338368 SPATA12Q7Z6I5 190 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 M0R2P5 195 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 TSPAN13O95857 204 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 TIMM21Q9BVV7 248 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 PCP2Q8IVA1 136 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 CEP350Q5VT06 3117 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 MRPS12O15235 138 aaKnown RBP4.76□□□□□ -1.65
PRKDC-202ENST00000338368 OCIAD2Q56VL3 154 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 DNAJC30Q96LL9 226 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 TRAV8-2A0A0B4J237 113 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 ZNF625Q96I27 306 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-202ENST00000338368 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-202ENST00000338368 PSMB8P28062 276 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 TRAV25A0A0B4J276 109 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 NPC2P61916 151 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 BVES-AS1Q5T3Y7 98 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 ADAMTSL5Q6ZMM2 481 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 GATD1Q8NB37 220 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 IGLV1-40P01703 118 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 HIST2H2BCQ6DN03 193 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 MDFICQ9P1T7 246 aa4.76□□□□□ -1.65
PRKDC-202ENST00000338368 MYMXA0A1B0GTQ4 84 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 C6orf226Q5I0X4 101 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 PGPEP1Q9NXJ5 209 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 PRIMA1Q86XR5 153 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 ZFAND2AQ8N6M9 145 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 TRBV25-1A0A075B6N4 114 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 F8W735 103 aaPredicted RBP4.75□□□□□ -1.65
PRKDC-202ENST00000338368 LGALS9O00182 355 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 F8WEM9 126 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 NPSP0C0P6 89 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 SS18Q15532 418 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 ZNF702PQ9H963 129 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 CLPSL1A2RUU4 121 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 DNAJC9-AS1A6NH13 148 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 Q6ZVH6 145 aa4.75□□□□□ -1.65
PRKDC-202ENST00000338368 C4orf3Q8WVX3 66 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms