RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 JPT2Q9H910 190 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 V9GYV3 84 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 TRGC1P0CF51 173 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 CTRLP40313 264 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 TWIST1Q15672 202 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 FAM74A4Q5TZK3 123 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
SPTLC1-202ENST00000337841 A0A087WWL8 130 aa8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 CRYGDP07320 174 aa8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 C14orf178Q8N769 122 aaPredicted RBP8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 AP1S3Q96PC3 154 aa8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 NAT8BQ9UHF3 227 aa8.33□□□□□ -1.08
SPTLC1-202ENST00000337841 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 F5H697 171 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 P0DMU3 169 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 RIGQ13278 110 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 CNFNQ9BYD5 112 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 MSRB1Q9NZV6 116 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
SPTLC1-202ENST00000337841 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 GYPEP15421 78 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 RAB4BP61018 213 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 RHOHQ15669 191 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 RNF212Q495C1 297 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 LGALS9CQ6DKI2 356 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
SPTLC1-202ENST00000337841 MUC4Q99102 2169 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 ADCYAP1P18509 176 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 SRIP30626 198 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 CCL18P55774 89 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 ZNF56Q15929 161 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 Q6ZSN1 163 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 CTDSP1Q9GZU7 261 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
SPTLC1-202ENST00000337841 A0A096LPF7 62 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 K7EQD1 137 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 LY6G6CO95867 125 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 EVI2AP22794 236 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
SPTLC1-202ENST00000337841 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
SPTLC1-202ENST00000337841 A0A1B0GW15 77 aa8.28□□□□□ -1.08
SPTLC1-202ENST00000337841 H7C1H1 209 aa8.28□□□□□ -1.08
SPTLC1-202ENST00000337841 MGPP08493 103 aa8.28□□□□□ -1.08
SPTLC1-202ENST00000337841 TNP2Q05952 138 aa8.28□□□□□ -1.08
SPTLC1-202ENST00000337841 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 LCE6AA0A183 80 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 GAGE12JA6NER3 117 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 APOC3P02656 99 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 S100A8P05109 93 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 LINC00315P59091 139 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 GAGE1Q13065 139 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 GAGE4Q13068 117 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 GAGE5Q13069 117 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 GAGE13Q4V321 117 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 CLRN3Q8NCR9 226 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 LINC00476Q8WZB0 136 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 IMMP2LQ96T52 175 aa8.27□□□□□ -1.09
SPTLC1-202ENST00000337841 DNAH7Q8WXX0 4024 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 C7orf77A4D0Y5 90 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 RHEBQ15382 184 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 ESRGQ1W209 222 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 LYPD5Q6UWN5 251 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
SPTLC1-202ENST00000337841 SNAPINO95295 136 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 S100PP25815 95 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 CAMPP49913 170 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 KCNIP4Q6PIL6 250 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 SVBPQ8N300 66 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 ZNRF2Q8NHG8 242 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 FRZBQ92765 325 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 DNAJC30Q96LL9 226 aa8.25□□□□□ -1.09
SPTLC1-202ENST00000337841 RPS10P5Q9NQ39 176 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms