RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CSMD3Q7Z407 3707 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 GATA1P15976 413 aaPredicted RBP10.76□□□□□ -0.69
SEC13-201ENST00000337354 SSTP61278 116 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 VSIG2Q96IQ7 327 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 AP1S3Q96PC3 154 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 SAMD10Q9BYL1 202 aa10.76□□□□□ -0.69
SEC13-201ENST00000337354 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
SEC13-201ENST00000337354 IGHV3-73A0A0B4J1V6 119 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 A0A0J9YY99 117 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 LCE6AA0A183 80 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 TWIST1Q15672 202 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 NDUFA5Q16718 116 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 RNF212Q495C1 297 aa10.75□□□□□ -0.69
SEC13-201ENST00000337354 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 A0A087WWL8 130 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 FAM74A4Q5TZK3 123 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
SEC13-201ENST00000337354 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 MSRB1Q9NZV6 116 aa10.74□□□□□ -0.69
SEC13-201ENST00000337354 NUDT3O95989 172 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 RAB4BP61018 213 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 RHOHQ15669 191 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
SEC13-201ENST00000337354 SMIM15Q7Z3B0 74 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 CTDSP1Q9GZU7 261 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 KIF25-AS1Q9Y6Z4 181 aa10.73□□□□□ -0.69
SEC13-201ENST00000337354 RIGQ13278 110 aa10.72□□□□□ -0.69
SEC13-201ENST00000337354 ICOSQ9Y6W8 199 aa10.72□□□□□ -0.69
SEC13-201ENST00000337354 P0DMU3 169 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 EVI2AP22794 236 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 Q6ZSN1 163 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 DPH3P1Q9H4G8 78 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 TMEM242Q9NWH2 141 aa10.71□□□□□ -0.69
SEC13-201ENST00000337354 MUC4Q99102 2169 aa10.71□□□□□ -0.7
SEC13-201ENST00000337354 A0A096LPF7 62 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 TRBV10-1A0A0K0K1A3 114 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 A0A1B0GW15 77 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 K7EQD1 137 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 GYPEP15421 78 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 LINC00315P59091 139 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 IMMP2LQ96T52 175 aa10.7□□□□□ -0.7
SEC13-201ENST00000337354 F5H697 171 aa10.69□□□□□ -0.7
SEC13-201ENST00000337354 RHEBQ15382 184 aa10.69□□□□□ -0.7
SEC13-201ENST00000337354 ZNF56Q15929 161 aa10.69□□□□□ -0.7
SEC13-201ENST00000337354 DYNC2H1Q8NCM8 4307 aaKnown RBP10.69□□□□□ -0.7
SEC13-201ENST00000337354 APOC3P02656 99 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 SRIP30626 198 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 CCL18P55774 89 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 SLC7A5P1Q8MH63 180 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 SVBPQ8N300 66 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 RYR3Q15413 4870 aa10.68□□□□□ -0.7
SEC13-201ENST00000337354 A0A087WWC5 75 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 H7C1H1 209 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 SNAPINO95295 136 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 S100A8P05109 93 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 FRZBQ92765 325 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 RYR2Q92736 4967 aa10.67□□□□□ -0.7
SEC13-201ENST00000337354 LY6G6CO95867 125 aa10.66□□□□□ -0.7
SEC13-201ENST00000337354 MGPP08493 103 aa10.66□□□□□ -0.7
SEC13-201ENST00000337354 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
SEC13-201ENST00000337354 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
SEC13-201ENST00000337354 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
SEC13-201ENST00000337354 LOC100131303A0A0U1RQF7 123 aa10.65□□□□□ -0.7
SEC13-201ENST00000337354 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
SEC13-201ENST00000337354 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.7
SEC13-201ENST00000337354 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
SEC13-201ENST00000337354 BTF3L4Q96K17 158 aa10.65□□□□□ -0.7
SEC13-201ENST00000337354 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.71
SEC13-201ENST00000337354 M0QY20 66 aa10.65□□□□□ -0.71
SEC13-201ENST00000337354 ESRGQ1W209 222 aa10.65□□□□□ -0.71
SEC13-201ENST00000337354 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.71
SEC13-201ENST00000337354 RPS10P5Q9NQ39 176 aa10.65□□□□□ -0.71
SEC13-201ENST00000337354 LYSTQ99698 3801 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 S100PP25815 95 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 CAMPP49913 170 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 TIRAPP58753 221 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 HBBP68871 147 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 GAGE1Q13065 139 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 GAGE4Q13068 117 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 GAGE5Q13069 117 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms