RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FAM19A4Q96LR4 140 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 UTP20O75691 2785 aaKnown RBP17.74■□□□□ 0.43
TSKU-201ENST00000333090 A0A087WWL8 130 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 TCL1BO95988 128 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 MOB4Q9Y3A3 225 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 F5H697 171 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 NDUFA4O00483 81 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 SPINK8P0C7L1 97 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 BPESC1Q9GZL8 116 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 KIF25-AS1Q9Y6Z4 181 aa17.74■□□□□ 0.43
TSKU-201ENST00000333090 KIR2DL4Q99706 377 aa17.73■□□□□ 0.43
TSKU-201ENST00000333090 CFC1BP0CG36 223 aa17.73■□□□□ 0.43
TSKU-201ENST00000333090 CFC1P0CG37 223 aa17.73■□□□□ 0.43
TSKU-201ENST00000333090 SUMO4Q6EEV6 95 aa17.73■□□□□ 0.43
TSKU-201ENST00000333090 MT-ATP8P03928 68 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 UBTD1Q9HAC8 227 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 IGHV3-30P01768 117 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 IGHV3-30-5P0DP03 117 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 SRD5A1P18405 259 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 C19orf54Q5BKX5 351 aa17.72■□□□□ 0.43
TSKU-201ENST00000333090 IGHV4OR15-8A0A075B7B6 117 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 A0A087WW49 117 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 POLR2KP53803 58 aaKnown RBP17.71■□□□□ 0.43
TSKU-201ENST00000333090 TEN1Q86WV5 123 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 CARD19Q96LW7 228 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 LMO4P61968 165 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 POM121L12Q8N7R1 296 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 ZNRF2Q8NHG8 242 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 PPDPFLQ8WWR9 84 aa17.71■□□□□ 0.43
TSKU-201ENST00000333090 APRG1Q8IVJ8 170 aa17.71■□□□□ 0.42
TSKU-201ENST00000333090 SDHAF1A6NFY7 115 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 NXPH4O95158 308 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 SCGB1C2P0DMR2 95 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 FAM159AQ6UWV7 190 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 VCYO14598 125 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 CRYBA4P53673 196 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 XGP55808 180 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 C10orf126Q8N4M7 172 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 SLC25A29Q8N8R3 303 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 CLUHP3Q96NS8 147 aa17.7■□□□□ 0.42
TSKU-201ENST00000333090 CFAP46Q8IYW2 2715 aa17.69■□□□□ 0.42
TSKU-201ENST00000333090 Q6ZUT4 128 aa17.69■□□□□ 0.42
TSKU-201ENST00000333090 TMEM141Q96I45 108 aa17.69■□□□□ 0.42
TSKU-201ENST00000333090 GEMIN7Q9H840 131 aaKnown RBP17.69■□□□□ 0.42
TSKU-201ENST00000333090 Q5PR19 223 aa17.69■□□□□ 0.42
TSKU-201ENST00000333090 RHPN1-AS1Q9BWJ2 59 aa17.69■□□□□ 0.42
TSKU-201ENST00000333090 FAM74A4Q5TZK3 123 aa17.68■□□□□ 0.42
TSKU-201ENST00000333090 BRD3OSQ6XYD6 125 aa17.68■□□□□ 0.42
TSKU-201ENST00000333090 TRBV20-1A0A075B6N2 111 aa17.68■□□□□ 0.42
TSKU-201ENST00000333090 A8MWV9 139 aa17.68■□□□□ 0.42
TSKU-201ENST00000333090 RPL32P62910 135 aaKnown RBP17.68■□□□□ 0.42
TSKU-201ENST00000333090 TIMM17AQ99595 171 aa17.68■□□□□ 0.42
TSKU-201ENST00000333090 ZNF256Q9Y2P7 627 aaPredicted RBP17.67■□□□□ 0.42
TSKU-201ENST00000333090 J3QQQ9 107 aa17.67■□□□□ 0.42
TSKU-201ENST00000333090 FLNCQ14315 2725 aa17.66■□□□□ 0.42
TSKU-201ENST00000333090 PRO1854Q9UHT4 67 aa17.66■□□□□ 0.42
TSKU-201ENST00000333090 TRAV26-1A0A087WT03 109 aa17.66■□□□□ 0.42
TSKU-201ENST00000333090 LGALS3P17931 250 aaKnown RBP17.66■□□□□ 0.42
TSKU-201ENST00000333090 ZNF876PQ49A33 203 aa17.66■□□□□ 0.42
TSKU-201ENST00000333090 C19orf84I3L1E1 186 aa17.65■□□□□ 0.42
TSKU-201ENST00000333090 LY6EQ16553 131 aa17.65■□□□□ 0.42
TSKU-201ENST00000333090 RAX2Q96IS3 184 aa17.65■□□□□ 0.42
TSKU-201ENST00000333090 AMELXQ99217 191 aa17.65■□□□□ 0.42
TSKU-201ENST00000333090 TRAV12-3A0A0B4J271 114 aa17.64■□□□□ 0.42
TSKU-201ENST00000333090 TRBV7-9A0A0J9YWB2 115 aa17.64■□□□□ 0.42
TSKU-201ENST00000333090 PF4V1P10720 104 aa17.64■□□□□ 0.42
TSKU-201ENST00000333090 OPRPNQ99935 248 aaPredicted RBP17.64■□□□□ 0.42
TSKU-201ENST00000333090 PKD1L2Q7Z442 2459 aa17.64■□□□□ 0.41
TSKU-201ENST00000333090 KLLNB2CW77 178 aa17.64■□□□□ 0.41
TSKU-201ENST00000333090 CRIP2P52943 208 aaPredicted RBP17.64■□□□□ 0.41
TSKU-201ENST00000333090 ANKRD29Q8N6D5 301 aa17.64■□□□□ 0.41
TSKU-201ENST00000333090 TRBV27A0A0K0K1C4 114 aa17.62■□□□□ 0.41
TSKU-201ENST00000333090 EDN2P20800 178 aa17.62■□□□□ 0.41
TSKU-201ENST00000333090 IGHV3-64A0A075B6Q5 118 aa17.62■□□□□ 0.41
TSKU-201ENST00000333090 A4D1N5 150 aa17.62■□□□□ 0.41
TSKU-201ENST00000333090 H7C2G1 150 aa17.61■□□□□ 0.41
TSKU-201ENST00000333090 UCNP55089 124 aa17.61■□□□□ 0.41
TSKU-201ENST00000333090 SBSPONQ8IVN8 264 aa17.61■□□□□ 0.41
TSKU-201ENST00000333090 USMG5Q96IX5 58 aa17.61■□□□□ 0.41
TSKU-201ENST00000333090 ZNF688P0C7X2 276 aa17.6■□□□□ 0.41
TSKU-201ENST00000333090 ZNF56Q15929 161 aa17.6■□□□□ 0.41
TSKU-201ENST00000333090 DAZ1Q9NQZ3 744 aaKnown RBP17.6■□□□□ 0.41
TSKU-201ENST00000333090 TRAV2A0A0B4J234 112 aa17.59■□□□□ 0.41
TSKU-201ENST00000333090 ABCA2Q9BZC7 2435 aa17.59■□□□□ 0.41
TSKU-201ENST00000333090 LGALS9O00182 355 aa17.58■□□□□ 0.41
TSKU-201ENST00000333090 IGHV1-69P01742 117 aa17.58■□□□□ 0.41
TSKU-201ENST00000333090 C9JAW5 83 aa17.58■□□□□ 0.4
TSKU-201ENST00000333090 VCX2Q9H322 139 aa17.58■□□□□ 0.4
TSKU-201ENST00000333090 SLC25A20O43772 301 aa17.57■□□□□ 0.4
TSKU-201ENST00000333090 TRPT1Q86TN4 253 aaKnown RBP17.57■□□□□ 0.4
TSKU-201ENST00000333090 IGKV3-20P01619 116 aa17.57■□□□□ 0.4
TSKU-201ENST00000333090 MDFICQ9P1T7 246 aa17.57■□□□□ 0.4
TSKU-201ENST00000333090 TRBV6-5A0A0K0K1A5 114 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 EIF4EBP3O60516 100 aaPredicted RBP17.56■□□□□ 0.4
TSKU-201ENST00000333090 BLCAPP62952 87 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 CENPEQ02224 2701 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 TRAV12-2A0A075B6T6 113 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 TMEM223A0PJW6 202 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 ID1P41134 155 aa17.56■□□□□ 0.4
TSKU-201ENST00000333090 IGHV3-33P01772 117 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms