RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 KLHL30-AS1Q8NEE0 82 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
ATP2C1-201ENST00000328560 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 ZNF56Q15929 161 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 ZNF479Q96JC4 524 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 TM2D2Q9BX73 214 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 CSMD2Q7Z408 3487 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
ATP2C1-201ENST00000328560 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
ATP2C1-201ENST00000328560 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
ATP2C1-201ENST00000328560 NAV2Q8IVL1 2488 aa10.5□□□□□ -0.73
ATP2C1-201ENST00000328560 ZNF462Q96JM2 2506 aa10.5□□□□□ -0.73
ATP2C1-201ENST00000328560 ABCA12Q86UK0 2595 aa10.5□□□□□ -0.73
ATP2C1-201ENST00000328560 SDHAF1A6NFY7 115 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 KLLNB2CW77 178 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 IGLL5B9A064 214 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 ANKRD17O75179 2603 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 PPP1R17O96001 155 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 KHDC1LQ5JSQ8 128 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 IGSF10Q6WRI0 2623 aa10.49□□□□□ -0.73
ATP2C1-201ENST00000328560 H3BMG7 143 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 LINC00315P59091 139 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 PSMB8P28062 276 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 J3QLI3 93 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 Q8N1Y9 231 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
ATP2C1-201ENST00000328560 CFHR3Q02985 330 aa10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 OPRPNQ99935 248 aaPredicted RBP10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 K7EMT4 169 aa10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 VCYO14598 125 aa10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
ATP2C1-201ENST00000328560 IGHV3-73A0A0B4J1V6 119 aa10.46□□□□□ -0.73
ATP2C1-201ENST00000328560 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
ATP2C1-201ENST00000328560 BRI3O95415 125 aa10.46□□□□□ -0.73
ATP2C1-201ENST00000328560 WFDC2Q14508 124 aa10.46□□□□□ -0.73
ATP2C1-201ENST00000328560 E9PLD3 99 aa10.46□□□□□ -0.74
ATP2C1-201ENST00000328560 APOMO95445 188 aa10.46□□□□□ -0.74
ATP2C1-201ENST00000328560 CRYGDP07320 174 aa10.46□□□□□ -0.74
ATP2C1-201ENST00000328560 HIST2H2BDQ6DRA6 164 aa10.46□□□□□ -0.74
ATP2C1-201ENST00000328560 BEX4Q9NWD9 120 aaPredicted RBP10.46□□□□□ -0.74
ATP2C1-201ENST00000328560 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 TSHBP01222 138 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 A0A087WW49 117 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 A0A0J9YX75 114 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 G3V4G9 280 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 TAL2Q16559 108 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 IGHV3-64A0A075B6Q5 118 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
ATP2C1-201ENST00000328560 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 PMVKQ15126 192 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 FOXI2Q6ZQN5 318 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 VPREB3Q9UKI3 123 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 PRM2P04554 102 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
ATP2C1-201ENST00000328560 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 HERVK_113P61574 105 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 SETD2Q9BYW2 2564 aaPredicted RBP10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 NXPH4O95158 308 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 ETDBQ3ZM63 59 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 WNK1Q9H4A3 2382 aa10.43□□□□□ -0.74
ATP2C1-201ENST00000328560 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
ATP2C1-201ENST00000328560 K7EQG2 157 aa10.42□□□□□ -0.74
ATP2C1-201ENST00000328560 LINC01549A6NIU2 74 aa10.42□□□□□ -0.74
ATP2C1-201ENST00000328560 IGLV4-69A0A075B6H9 119 aa10.42□□□□□ -0.74
ATP2C1-201ENST00000328560 C18orf65Q6ZTR6 163 aa10.41□□□□□ -0.74
ATP2C1-201ENST00000328560 ELANEP08246 267 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms