RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
PPP3CA-201ENST00000323055 NOP10Q9NPE3 64 aaKnown RBP12.99□□□□□ -0.33
PPP3CA-201ENST00000323055 M0R2P5 195 aa12.99□□□□□ -0.33
PPP3CA-201ENST00000323055 YPEL4Q96NS1 127 aa12.99□□□□□ -0.33
PPP3CA-201ENST00000323055 CITED2Q99967 270 aaPredicted RBP12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 CTRLP40313 264 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 JPT2Q9H910 190 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 PRSS29PA6NIE9 313 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 CD5LO43866 347 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 HLA-DRB4P13762 266 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 MBD6Q96DN6 1003 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 HLA-DRB4X5D2U9 266 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 A0A1B0GXF2 115 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 PCP2Q8IVA1 136 aa12.98□□□□□ -0.33
PPP3CA-201ENST00000323055 SMAD5-AS1Q9Y6J3 95 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 AVPP01185 164 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 PCSK5Q92824 1860 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 A0A096LPF7 62 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 KIR2DL5BA0A0G2JN68 375 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 KIR2DL5BA0A0G2JPC4 375 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 SUMO4Q6EEV6 95 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 KIR2DL5AQ8N109 375 aa12.97□□□□□ -0.33
PPP3CA-201ENST00000323055 MYCNOSP40205 109 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 CRIP1P50238 77 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 TMEM141Q96I45 108 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 F5H768 121 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 Q6ZVH6 145 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 MDFICQ9P1T7 246 aa12.96□□□□□ -0.33
PPP3CA-201ENST00000323055 PGPEP1Q9NXJ5 209 aa12.96□□□□□ -0.34
PPP3CA-201ENST00000323055 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
PPP3CA-201ENST00000323055 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
PPP3CA-201ENST00000323055 CRPP02741 224 aa12.95□□□□□ -0.34
PPP3CA-201ENST00000323055 RASL10AQ92737 203 aa12.95□□□□□ -0.34
PPP3CA-201ENST00000323055 GAGE6Q13070 117 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 A0A0J9YX75 114 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 Q6YL49 198 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 DAD1P61803 113 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 PAX2Q02962 417 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 C20orf173Q96LM9 149 aa12.94□□□□□ -0.34
PPP3CA-201ENST00000323055 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 MRPL52Q86TS9 123 aaKnown RBP12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
PPP3CA-201ENST00000323055 CKS1BP61024 79 aa12.92□□□□□ -0.34
PPP3CA-201ENST00000323055 TRBV25-1A0A075B6N4 114 aa12.92□□□□□ -0.34
PPP3CA-201ENST00000323055 IGLV2-11P01706 119 aa12.92□□□□□ -0.34
PPP3CA-201ENST00000323055 DPH3Q96FX2 82 aa12.92□□□□□ -0.34
PPP3CA-201ENST00000323055 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 ZNF292O60281 2723 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 MYMXA0A1B0GTQ4 84 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 LINC01545Q5VT33 79 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 PAX4O43316 350 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 ZNF124Q15973 351 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 BVES-AS1Q5T3Y7 98 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
PPP3CA-201ENST00000323055 PCP4P48539 62 aa12.9□□□□□ -0.34
PPP3CA-201ENST00000323055 LAMA1P25391 3075 aa12.9□□□□□ -0.34
PPP3CA-201ENST00000323055 NPSP0C0P6 89 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 ZFP2Q6ZN57 461 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 LRRC75A-AS1Q8N1F1 130 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 MTURNQ8N3F0 131 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
PPP3CA-201ENST00000323055 K7ERJ3 54 aa12.88□□□□□ -0.35
PPP3CA-201ENST00000323055 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
PPP3CA-201ENST00000323055 J3QQQ9 107 aa12.88□□□□□ -0.35
PPP3CA-201ENST00000323055 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
PPP3CA-201ENST00000323055 TET2Q6N021 2002 aaPredicted RBP12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 TRAV8-2A0A0B4J237 113 aa12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 A0A0J9YY99 117 aa12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 VCANP13611 3396 aa12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 TMEM86BQ8N661 226 aa12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 TNRC6BQ9UPQ9 1833 aaKnown RBP12.87□□□□□ -0.35
PPP3CA-201ENST00000323055 K7EQG2 157 aa12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 CLPSL2Q6UWE3 100 aa12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 Q6ZSV7 163 aa12.86□□□□□ -0.35
PPP3CA-201ENST00000323055 A0A0J9YXV3 536 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms