RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 APRG1Q8IVJ8 170 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 K7EMT4 169 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 LINC00315P59091 139 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 TP53TG1Q9Y2A0 90 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 WNK1Q9H4A3 2382 aa13□□□□□ -0.33
COL9A1-201ENST00000320755 TRAV12-1A0A0B4J245 112 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 K7ERU9 68 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 KIF25-AS1Q9Y6Z4 181 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 MED14OSP0DP75 135 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
COL9A1-201ENST00000320755 LINC01356Q8N9X3 169 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
COL9A1-201ENST00000320755 CCDC168Q8NDH2 2452 aa12.98□□□□□ -0.33
COL9A1-201ENST00000320755 PRADC1Q9BSG0 188 aa12.98□□□□□ -0.33
COL9A1-201ENST00000320755 ZNF56Q15929 161 aa12.98□□□□□ -0.33
COL9A1-201ENST00000320755 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
COL9A1-201ENST00000320755 TM2D2Q9BX73 214 aa12.98□□□□□ -0.33
COL9A1-201ENST00000320755 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
COL9A1-201ENST00000320755 SDHAF1A6NFY7 115 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 SLC25A16P16260 332 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 Q8N1Y9 231 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 MYMXA0A1B0GTQ4 84 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 A0A087WW49 117 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 PPP1R17O96001 155 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
COL9A1-201ENST00000320755 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
COL9A1-201ENST00000320755 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
COL9A1-201ENST00000320755 ZFP2Q6ZN57 461 aa12.96□□□□□ -0.33
COL9A1-201ENST00000320755 KIR2DL4Q99706 377 aa12.96□□□□□ -0.33
COL9A1-201ENST00000320755 A0A0J9YX75 114 aa12.96□□□□□ -0.34
COL9A1-201ENST00000320755 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.34
COL9A1-201ENST00000320755 PHLDA1Q8WV24 401 aaPredicted RBP12.96□□□□□ -0.34
COL9A1-201ENST00000320755 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
COL9A1-201ENST00000320755 C12orf74Q32Q52 190 aa12.95□□□□□ -0.34
COL9A1-201ENST00000320755 TSHBP01222 138 aa12.95□□□□□ -0.34
COL9A1-201ENST00000320755 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
COL9A1-201ENST00000320755 GATA3P23771 443 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 IGHV3-16A0A0C4DH30 117 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 VCYO14598 125 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 NXPH4O95158 308 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 CRYGDP07320 174 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-201ENST00000320755 OPRPNQ99935 248 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-201ENST00000320755 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 PRM2P04554 102 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 LGALS1P09382 135 aaKnown RBP12.94□□□□□ -0.34
COL9A1-201ENST00000320755 POLR2KP53803 58 aaKnown RBP12.94□□□□□ -0.34
COL9A1-201ENST00000320755 C18orf65Q6ZTR6 163 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 MTURNQ8N3F0 131 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 OR5A1Q8NGJ0 315 aa12.94□□□□□ -0.34
COL9A1-201ENST00000320755 IGLL5B9A064 214 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 K7EQG2 157 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 AMTNQ6UX39 209 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 IGHV3-73A0A0B4J1V6 119 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
COL9A1-201ENST00000320755 DSCR9P59020 149 aa12.92□□□□□ -0.34
COL9A1-201ENST00000320755 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL9A1-201ENST00000320755 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
COL9A1-201ENST00000320755 TMEM170BQ5T4T1 132 aa12.92□□□□□ -0.34
COL9A1-201ENST00000320755 KNCNA6PVL3 124 aa12.92□□□□□ -0.34
COL9A1-201ENST00000320755 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
COL9A1-201ENST00000320755 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-201ENST00000320755 NF1P21359 2839 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 E9PLD3 99 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 CHD6Q8TD26 2715 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 NACAE9PAV3 2078 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
COL9A1-201ENST00000320755 IGIPA6NJ69 53 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 H3BMG7 143 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 SLURP1P55000 103 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 SYT8Q8NBV8 401 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 VPREB3Q9UKI3 123 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
COL9A1-201ENST00000320755 KRTAP10-9P60411 292 aa12.9□□□□□ -0.35
COL9A1-201ENST00000320755 PMVKQ15126 192 aa12.9□□□□□ -0.35
COL9A1-201ENST00000320755 POM121L12Q8N7R1 296 aa12.9□□□□□ -0.35
COL9A1-201ENST00000320755 TAL2Q16559 108 aa12.89□□□□□ -0.35
COL9A1-201ENST00000320755 C9orf85Q96MD7 179 aa12.89□□□□□ -0.35
COL9A1-201ENST00000320755 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
COL9A1-201ENST00000320755 IGLV4-69A0A075B6H9 119 aa12.89□□□□□ -0.35
COL9A1-201ENST00000320755 COX6B1P14854 86 aa12.89□□□□□ -0.35
COL9A1-201ENST00000320755 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
COL9A1-201ENST00000320755 M0QY20 66 aa12.88□□□□□ -0.35
COL9A1-201ENST00000320755 MORN3Q6PF18 240 aaPredicted RBP12.88□□□□□ -0.35
COL9A1-201ENST00000320755 DEFB131AP59861 70 aa12.88□□□□□ -0.35
COL9A1-201ENST00000320755 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
COL9A1-201ENST00000320755 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
COL9A1-201ENST00000320755 IGHV3-64A0A075B6Q5 118 aa12.87□□□□□ -0.35
COL9A1-201ENST00000320755 A0A096LNT2 108 aa12.87□□□□□ -0.35
COL9A1-201ENST00000320755 LGALS9O00182 355 aa12.87□□□□□ -0.35
COL9A1-201ENST00000320755 WFDC2Q14508 124 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms